Difference between revisions of "TSS:Hg 231662.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans= | + | |all_trans=HGNC:27038 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_178469 | |nearest_refseq=NM_178469 | ||
|nearest_unigene=Hs.323991 | |nearest_unigene=Hs.323991 | ||
| − | |num_trans= | + | |num_trans=138307 |
|species=human | |species=human | ||
|start=136758152 | |start=136758152 | ||
| Line 29: | Line 29: | ||
|strand=- | |strand=- | ||
|transcript_name=BC130465 BC132714 | |transcript_name=BC130465 BC132714 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_231662.1 | |tss_id=hg_231662.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 10:54, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136758154 |
|---|---|
| End of the center position in the TSS region: | 136758155 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC130465 BC132714 |
|---|---|
| Distance: | -78 |
| Num_trans: | 138307 |
| All_trans: | HGNC:27038 |
TATA-Box annotation
| Distance to TSS: | 125 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
