Difference between revisions of "TSS:Hg 232068.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |NOPP140= | ||
| + | |NS5ATP13= | ||
| + | |P130= | ||
| + | |all_trans=HGNC:15608 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=26 |
| − | |end= | + | |end=102152409 |
| + | |end_of_center_position=102152409 | ||
|entrez_id=9221 | |entrez_id=9221 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=NOPP130 | + | |gene_alias=NOPP130{{!}}NOPP140{{!}}NS5ATP13{{!}}P130 |
|gene_description=nucleolar and coiled-body phosphoprotein 1 | |gene_description=nucleolar and coiled-body phosphoprotein 1 | ||
| − | |gene_name=NOLC1 | + | |gene_id=9221 |
| + | |gene_name=nucleolar and coiled-body phosphoprotein 1 | ||
| + | |gene_source=HGNC:15608 | ||
| + | |gene_symbol=NOLC1 | ||
| + | |gene_synonyms=KIAA0035 NOPP130 NOPP140 P130 Srp40 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:15608 | ||
|nearest_ensembl=ENSG00000166197 | |nearest_ensembl=ENSG00000166197 | ||
|nearest_promoter_id=NM_001284389 | |nearest_promoter_id=NM_001284389 | ||
|nearest_refseq=NM_004741 | |nearest_refseq=NM_004741 | ||
|nearest_unigene=Hs.523238 | |nearest_unigene=Hs.523238 | ||
| − | |num_trans= | + | |num_trans=9221 |
|species=human | |species=human | ||
| − | |start= | + | |start=102152408 |
| − | |strand= | + | |start_of_center_position=102152408 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=ENST00000461421.5 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232068.1 | |tss_id=hg_232068.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=S4R349 | ||
}} | }} | ||
Latest revision as of 11:02, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102152408 |
|---|---|
| End of the center position in the TSS region: | 102152409 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000461421.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9221 |
| All_trans: | HGNC:15608 |
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NM_001284389 |
| Entrez ID: | 9221 |
| Nearest Unigene: | Hs.523238 |
| Nearest Refseq: | NM_004741 |
| Nearest Ensembl: | ENSG00000166197 |
| Gene Name: | nucleolar and coiled-body phosphoprotein 1 |
| Gene Alias: | NOPP130|NOPP140|NS5ATP13|P130 |
| Gene Description: | nucleolar and coiled-body phosphoprotein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
