Difference between revisions of "TSS:Hg 232138.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|TIAR= | |TIAR= | ||
| − | |all_trans= | + | |all_trans=HGNC:3689 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance=- | + | |distance=-18 |
|distance_to_tss=3539 | |distance_to_tss=3539 | ||
| − | |end= | + | |end=121593869 |
|end_of_center_position=121593869 | |end_of_center_position=121593869 | ||
|entrez_id=7073 | |entrez_id=7073 | ||
|gc_percent=0.328358 | |gc_percent=0.328358 | ||
| − | |gene_alias=TCBP | + | |gene_alias=TCBP{{!}}TIAR |
|gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | |gene_description=TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| − | |gene_id= | + | |gene_id=2263 |
| − | |gene_name= | + | |gene_name=fibroblast growth factor receptor 2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:3689 |
| − | |gene_symbol= | + | |gene_symbol=FGFR2 |
| − | |gene_synonyms= | + | |gene_synonyms=CD332 CEK3 ECT1 K-SAM TK14 TK25 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:3689 |
|nearest_ensembl=ENSG00000151923 | |nearest_ensembl=ENSG00000151923 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323969 |
|nearest_refseq=NM_003252 | |nearest_refseq=NM_003252 | ||
|nearest_unigene=Hs.501203 | |nearest_unigene=Hs.501203 | ||
| − | |num_trans= | + | |num_trans=2263 |
|species=human | |species=human | ||
| − | |start= | + | |start=121593868 |
|start_of_center_position=121593868 | |start_of_center_position=121593868 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000611527.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232138.1 | |tss_id=hg_232138.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A087X2D1 |
}} | }} | ||
Latest revision as of 11:04, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121593868 |
|---|---|
| End of the center position in the TSS region: | 121593869 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000611527.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 2263 |
| All_trans: | HGNC:3689 |
TATA-Box annotation
| Distance to TSS: | 3539 |
|---|---|
| Nearest PromoterID: | NM_001323969 |
| Entrez ID: | 7073 |
| Nearest Unigene: | Hs.501203 |
| Nearest Refseq: | NM_003252 |
| Nearest Ensembl: | ENSG00000151923 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | TCBP|TIAR |
| Gene Description: | TIA1 cytotoxic granule associated RNA binding protein like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
