Difference between revisions of "TSS:Hg 232211.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:30964 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=3 |
| − | |distance_to_tss= | + | |distance_to_tss=-48800 |
| − | |end= | + | |end=22928074 |
| − | |entrez_id= | + | |end_of_center_position=22928074 |
| + | |entrez_id=100128511 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | | | + | |gene_description=NEBL antisense RNA 1 |
| − | |gene_name= | + | |gene_id=219681 |
| − | |gene_type= | + | |gene_name=armadillo repeat containing 3 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:30964 |
| − | |nearest_promoter_id= | + | |gene_symbol=ARMC3 |
| − | |nearest_refseq= | + | |gene_synonyms=CT81 FLJ32827 |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id=HGNC:30964 |
| + | |nearest_ensembl=ENSG00000231920 | ||
| + | |nearest_promoter_id=NR_046283 | ||
| + | |nearest_refseq=NR_046283 | ||
| + | |nearest_unigene=Hs.635827 | ||
| + | |num_trans=219681 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=22928073 |
| + | |start_of_center_position=22928073 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000496741.5 ENST00000484642.5 AK302104 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232211.1 | |tss_id=hg_232211.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:05, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 22928073 |
|---|---|
| End of the center position in the TSS region: | 22928074 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000496741.5 ENST00000484642.5 AK302104 |
|---|---|
| Distance: | 3 |
| Num_trans: | 219681 |
| All_trans: | HGNC:30964 |
TATA-Box annotation
| Distance to TSS: | -48800 |
|---|---|
| Nearest PromoterID: | NR_046283 |
| Entrez ID: | 100128511 |
| Nearest Unigene: | Hs.635827 |
| Nearest Refseq: | NR_046283 |
| Nearest Ensembl: | ENSG00000231920 |
| Gene Name: | armadillo repeat containing 3 |
| Gene Alias: | - |
| Gene Description: | NEBL antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
