Difference between revisions of "TSS:Hg 232226.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|SSH3BP= | |SSH3BP= | ||
|SSH3BP1= | |SSH3BP1= | ||
| − | |all_trans= | + | |all_trans=HGNC:25583 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=-64 | |distance=-64 | ||
|distance_to_tss=5 | |distance_to_tss=5 | ||
| − | |end= | + | |end=27983374 |
|end_of_center_position=27983374 | |end_of_center_position=27983374 | ||
|entrez_id=10006 | |entrez_id=10006 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_005470 | |nearest_refseq=NM_005470 | ||
|nearest_unigene=Hs.508148 | |nearest_unigene=Hs.508148 | ||
| − | |num_trans= | + | |num_trans=55130 |
|species=human | |species=human | ||
| − | |start= | + | |start=27983373 |
|start_of_center_position=27983373 | |start_of_center_position=27983373 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000673384.1 AK302419 | |transcript_name=ENST00000673384.1 AK302419 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232226.1 | |tss_id=hg_232226.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A5F9ZI13 B7Z7R7 | |uniprot_id=A0A5F9ZI13 B7Z7R7 | ||
}} | }} | ||
Latest revision as of 11:06, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27983373 |
|---|---|
| End of the center position in the TSS region: | 27983374 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000673384.1 AK302419 |
|---|---|
| Distance: | -64 |
| Num_trans: | 55130 |
| All_trans: | HGNC:25583 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001178124 |
| Entrez ID: | 10006 |
| Nearest Unigene: | Hs.508148 |
| Nearest Refseq: | NM_005470 |
| Nearest Ensembl: | ENSG00000136754 |
| Gene Name: | outer dynein arm docking complex subunit 2 |
| Gene Alias: | ABI-1|ABLBP4|E3B1|NAP1BP|SSH3BP|SSH3BP1 |
| Gene Description: | abl interactor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
