Difference between revisions of "TSS:Hg 232258.1"
From referenceTSS
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|SE2-5LT1= | |SE2-5LT1= | ||
|SE2-5T2= | |SE2-5T2= | ||
| − | |all_trans= | + | |all_trans=HGNC:2352 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=46 | |distance=46 | ||
|distance_to_tss=388545 | |distance_to_tss=388545 | ||
| − | |end= | + | |end=35127378 |
|end_of_center_position=35127378 | |end_of_center_position=35127378 | ||
|entrez_id=56288 | |entrez_id=56288 | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_019619 | |nearest_refseq=NM_019619 | ||
|nearest_unigene=Hs.131489 | |nearest_unigene=Hs.131489 | ||
| − | |num_trans= | + | |num_trans=1390 |
|species=human | |species=human | ||
| − | |start= | + | |start=35127377 |
|start_of_center_position=35127377 | |start_of_center_position=35127377 | ||
| − | |strand= | + | |strand=+ |
|transcript_name=ENST00000489321.5 | |transcript_name=ENST00000489321.5 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232258.1 | |tss_id=hg_232258.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q03060 | |uniprot_id=Q03060 | ||
}} | }} | ||
Latest revision as of 11:06, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35127377 |
|---|---|
| End of the center position in the TSS region: | 35127378 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000489321.5 |
|---|---|
| Distance: | 46 |
| Num_trans: | 1390 |
| All_trans: | HGNC:2352 |
TATA-Box annotation
| Distance to TSS: | 388545 |
|---|---|
| Nearest PromoterID: | NM_001184785 |
| Entrez ID: | 56288 |
| Nearest Unigene: | Hs.131489 |
| Nearest Refseq: | NM_019619 |
| Nearest Ensembl: | ENSG00000148498 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 |
| Gene Description: | par-3 family cell polarity regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
