Difference between revisions of "TSS:Hg 232258.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Baz= |
| + | |PAR3= | ||
| + | |PAR3alpha= | ||
| + | |PARD-3= | ||
| + | |PARD3A= | ||
| + | |PPP1R118= | ||
| + | |SE2-5L16= | ||
| + | |SE2-5LT1= | ||
| + | |SE2-5T2= | ||
| + | |all_trans=HGNC:2352 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=46 |
| − | |distance_to_tss= | + | |distance_to_tss=388545 |
| − | |end= | + | |end=35127378 |
| + | |end_of_center_position=35127378 | ||
|entrez_id=56288 | |entrez_id=56288 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=ASIP | + | |gene_alias=ASIP{{!}}Baz{{!}}PAR3{{!}}PAR3alpha{{!}}PARD-3{{!}}PARD3A{{!}}PPP1R118{{!}}SE2-5L16{{!}}SE2-5LT1{{!}}SE2-5T2 |
|gene_description=par-3 family cell polarity regulator | |gene_description=par-3 family cell polarity regulator | ||
| − | |gene_id= | + | |gene_id=1390 |
| − | |gene_name= | + | |gene_name=cAMP responsive element modulator |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:2352 |
| − | |gene_symbol= | + | |gene_symbol=CREM |
| − | |gene_synonyms= | + | |gene_synonyms=hCREM-2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:2352 |
|nearest_ensembl=ENSG00000148498 | |nearest_ensembl=ENSG00000148498 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184785 |
|nearest_refseq=NM_019619 | |nearest_refseq=NM_019619 | ||
|nearest_unigene=Hs.131489 | |nearest_unigene=Hs.131489 | ||
| − | |num_trans= | + | |num_trans=1390 |
|species=human | |species=human | ||
| − | |start= | + | |start=35127377 |
| − | |strand= | + | |start_of_center_position=35127377 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000489321.5 |
| + | |tss_classification=yes | ||
|tss_id=hg_232258.1 | |tss_id=hg_232258.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q03060 |
}} | }} | ||
Latest revision as of 11:06, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35127377 |
|---|---|
| End of the center position in the TSS region: | 35127378 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000489321.5 |
|---|---|
| Distance: | 46 |
| Num_trans: | 1390 |
| All_trans: | HGNC:2352 |
TATA-Box annotation
| Distance to TSS: | 388545 |
|---|---|
| Nearest PromoterID: | NM_001184785 |
| Entrez ID: | 56288 |
| Nearest Unigene: | Hs.131489 |
| Nearest Refseq: | NM_019619 |
| Nearest Ensembl: | ENSG00000148498 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 |
| Gene Description: | par-3 family cell polarity regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
