Difference between revisions of "TSS:Hg 232278.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000306006.10:-16 NM_005674:-16 uc001jaw.5:-16 X82125:-16 |chr=chr10 |cpg_percent=0.01 |distance=-16 |distance_to_tss=16 |end=43568443 |entrez_id=8...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |MOK2= |
| + | |all_trans=HGNC:44989 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance=- | + | |distance=-14 |
|distance_to_tss=16 | |distance_to_tss=16 | ||
| − | |end= | + | |end=46398377 |
| + | |end_of_center_position=46398377 | ||
|entrez_id=8187 | |entrez_id=8187 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=HOK-2 | + | |gene_alias=HOK-2{{!}}MOK2 |
|gene_description=zinc finger protein 239 | |gene_description=zinc finger protein 239 | ||
| − | |gene_id= | + | |gene_id=643650 |
| − | |gene_name= | + | |gene_name=long intergenic non-protein coding RNA 842 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:44989 |
| − | |gene_symbol= | + | |gene_symbol=LINC00842 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:44989 |
|nearest_ensembl=ENSG00000196793 | |nearest_ensembl=ENSG00000196793 | ||
|nearest_promoter_id=NM_005674 | |nearest_promoter_id=NM_005674 | ||
|nearest_refseq=NM_005674 | |nearest_refseq=NM_005674 | ||
|nearest_unigene=Hs.25040 | |nearest_unigene=Hs.25040 | ||
| − | |num_trans= | + | |num_trans=643650 |
|species=human | |species=human | ||
| − | |start= | + | |start=46398375 |
| − | |strand= | + | |start_of_center_position=46398376 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000614356.1 BC033221 |
| + | |tss_classification=yes | ||
|tss_id=hg_232278.1 | |tss_id=hg_232278.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q8N4X2 |
}} | }} | ||
Latest revision as of 11:07, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46398376 |
|---|---|
| End of the center position in the TSS region: | 46398377 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000614356.1 BC033221 |
|---|---|
| Distance: | -14 |
| Num_trans: | 643650 |
| All_trans: | HGNC:44989 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_005674 |
| Entrez ID: | 8187 |
| Nearest Unigene: | Hs.25040 |
| Nearest Refseq: | NM_005674 |
| Nearest Ensembl: | ENSG00000196793 |
| Gene Name: | long intergenic non-protein coding RNA 842 |
| Gene Alias: | HOK-2|MOK2 |
| Gene Description: | zinc finger protein 239 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
