Difference between revisions of "TSS:Hg 232308.1"
From referenceTSS
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|distance=0 | |distance=0 | ||
|distance_to_tss=-128 | |distance_to_tss=-128 | ||
| − | |end= | + | |end=49613098 |
|end_of_center_position=49613098 | |end_of_center_position=49613098 | ||
|entrez_id=347688 | |entrez_id=347688 | ||
| Line 26: | Line 26: | ||
|num_trans=9 | |num_trans=9 | ||
|species=human | |species=human | ||
| − | |start= | + | |start=49613097 |
|start_of_center_position=49613097 | |start_of_center_position=49613097 | ||
| − | |strand= | + | |strand=+ |
|tata_box=35(GGCTATTTAAAC,-,0.00) | |tata_box=35(GGCTATTTAAAC,-,0.00) | ||
| − | |transcript_name=NM_020986 NM_020985 | + | |transcript_name=NM_020986.4 NM_020985.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232308.1 | |tss_id=hg_232308.1 | ||
Latest revision as of 11:07, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 49613097 |
|---|---|
| End of the center position in the TSS region: | 49613098 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_020986.4 NM_020985.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | NM_020986:0 NM_020985:0 ENST00000460699.5:10 ENST00000351556.7:10 ENST00000395559.6:10 D82340:10 ENST00000481336.5:21 D82339:21 D82341:21 |
TATA-Box annotation
| Distance to TSS: | -128 |
|---|---|
| Nearest PromoterID: | NM_177987 |
| Entrez ID: | 347688 |
| Nearest Unigene: | Hs.532659 |
| Nearest Refseq: | NM_177987 |
| Nearest Ensembl: | ENSG00000261456 |
| Gene Name: | choline O-acetyltransferase |
| Gene Alias: | OOMD|OOMD2|bA631M21.2 |
| Gene Description: | tubulin beta 8 class VIII |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 35(GGCTATTTAAAC,-,0.00) |
