Difference between revisions of "TSS:Hg 232330.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:6008 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=22 | |distance=22 | ||
|distance_to_tss=10158 | |distance_to_tss=10158 | ||
| − | |end= | + | |end=6062331 |
|end_of_center_position=6062331 | |end_of_center_position=6062331 | ||
|entrez_id=220965 | |entrez_id=220965 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_198215 | |nearest_refseq=NM_198215 | ||
|nearest_unigene=Hs.607594 | |nearest_unigene=Hs.607594 | ||
| − | |num_trans= | + | |num_trans=3559 |
|species=human | |species=human | ||
| − | |start= | + | |start=6062330 |
|start_of_center_position=6062330 | |start_of_center_position=6062330 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000379954.5 X01057 K03122 | |transcript_name=ENST00000379954.5 X01057 K03122 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232330.1 | |tss_id=hg_232330.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q5W005 | |uniprot_id=Q5W005 | ||
}} | }} | ||
Latest revision as of 11:08, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6062330 |
|---|---|
| End of the center position in the TSS region: | 6062331 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000379954.5 X01057 K03122 |
|---|---|
| Distance: | 22 |
| Num_trans: | 3559 |
| All_trans: | HGNC:6008 |
TATA-Box annotation
| Distance to TSS: | 10158 |
|---|---|
| Nearest PromoterID: | NM_198215 |
| Entrez ID: | 220965 |
| Nearest Unigene: | Hs.607594 |
| Nearest Refseq: | NM_198215 |
| Nearest Ensembl: | ENSG00000148541 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | FAM13C1 |
| Gene Description: | family with sequence similarity 13 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
