Difference between revisions of "TSS:Hg 232358.1"
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{{TSSDetail | {{TSSDetail | ||
|PRG3= | |PRG3= | ||
| − | |all_trans= | + | |all_trans=HGNC:13733 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance=- | + | |distance=-142 |
| − | |distance_to_tss= | + | |distance_to_tss=45 |
| − | |end= | + | |end=71812025 |
|end_of_center_position=71812025 | |end_of_center_position=71812025 | ||
|entrez_id=84883 | |entrez_id=84883 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| − | |gene_alias=AMID | + | |gene_alias=AMID{{!}}PRG3 |
| − | |gene_description= | + | |gene_description=apoptosis inducing factor mitochondria associated 2 |
| − | |gene_id= | + | |gene_id=64072 |
| − | |gene_name= | + | |gene_name=cadherin related 23 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:13733 |
| − | |gene_symbol= | + | |gene_symbol=CDH23 |
| − | |gene_synonyms= | + | |gene_synonyms=CDHR23 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:13733 |
|nearest_ensembl=ENSG00000042286 | |nearest_ensembl=ENSG00000042286 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_032797 |
|nearest_refseq=NM_032797 | |nearest_refseq=NM_032797 | ||
|nearest_unigene=Hs.650680 | |nearest_unigene=Hs.650680 | ||
| − | |num_trans= | + | |num_trans=64072 |
|species=human | |species=human | ||
| − | |start= | + | |start=71812024 |
|start_of_center_position=71812024 | |start_of_center_position=71812024 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=AY563161 AY563162 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_232358.1 | |tss_id=hg_232358.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9H251 |
}} | }} | ||
Latest revision as of 11:09, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 71812024 |
|---|---|
| End of the center position in the TSS region: | 71812025 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY563161 AY563162 |
|---|---|
| Distance: | -142 |
| Num_trans: | 64072 |
| All_trans: | HGNC:13733 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_032797 |
| Entrez ID: | 84883 |
| Nearest Unigene: | Hs.650680 |
| Nearest Refseq: | NM_032797 |
| Nearest Ensembl: | ENSG00000042286 |
| Gene Name: | cadherin related 23 |
| Gene Alias: | AMID|PRG3 |
| Gene Description: | apoptosis inducing factor mitochondria associated 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
