Difference between revisions of "TSS:Hg 232377.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=HGNC:7681 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-50 |
|distance_to_tss=23213 | |distance_to_tss=23213 | ||
| − | |end= | + | |end=73806824 |
| + | |end_of_center_position=73806824 | ||
|entrez_id=5033 | |entrez_id=5033 | ||
|gc_percent=0.338308 | |gc_percent=0.338308 | ||
|gene_alias=P4HA | |gene_alias=P4HA | ||
|gene_description=prolyl 4-hydroxylase subunit alpha 1 | |gene_description=prolyl 4-hydroxylase subunit alpha 1 | ||
| − | |gene_name= | + | |gene_id=8509 |
| + | |gene_name=N-deacetylase and N-sulfotransferase 2 | ||
| + | |gene_source=HGNC:7681 | ||
| + | |gene_symbol=NDST2 | ||
| + | |gene_synonyms=HSST2 NST2 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7681 | ||
|nearest_ensembl=ENSG00000122884 | |nearest_ensembl=ENSG00000122884 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000917 |
|nearest_refseq=NM_000917 | |nearest_refseq=NM_000917 | ||
|nearest_unigene=Hs.500047 | |nearest_unigene=Hs.500047 | ||
| − | |num_trans= | + | |num_trans=8509 |
|species=human | |species=human | ||
| − | |start= | + | |start=73806823 |
| − | |strand= | + | |start_of_center_position=73806823 |
| − | |transcript_name= | + | |strand=- |
| + | |transcript_name=AK310580 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232377.1 | |tss_id=hg_232377.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:09, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 73806823 |
|---|---|
| End of the center position in the TSS region: | 73806824 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK310580 |
|---|---|
| Distance: | -50 |
| Num_trans: | 8509 |
| All_trans: | HGNC:7681 |
TATA-Box annotation
| Distance to TSS: | 23213 |
|---|---|
| Nearest PromoterID: | NM_000917 |
| Entrez ID: | 5033 |
| Nearest Unigene: | Hs.500047 |
| Nearest Refseq: | NM_000917 |
| Nearest Ensembl: | ENSG00000122884 |
| Gene Name: | N-deacetylase and N-sulfotransferase 2 |
| Gene Alias: | P4HA |
| Gene Description: | prolyl 4-hydroxylase subunit alpha 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.338308 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
