Difference between revisions of "TSS:Hg 232396.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10411 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=20 |
|distance_to_tss=701 | |distance_to_tss=701 | ||
| − | |end= | + | |end=78033816 |
|end_of_center_position=78033816 | |end_of_center_position=78033816 | ||
|entrez_id=7417 | |entrez_id=7417 | ||
| Line 11: | Line 11: | ||
|gene_alias=POR | |gene_alias=POR | ||
|gene_description=voltage dependent anion channel 2 | |gene_description=voltage dependent anion channel 2 | ||
| − | |gene_id= | + | |gene_id=6229 |
| − | |gene_name= | + | |gene_name=ribosomal protein S24 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10411 |
| − | |gene_symbol= | + | |gene_symbol=RPS24 |
| − | |gene_synonyms= | + | |gene_synonyms=S24 eS24 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10411 |
|nearest_ensembl=ENSG00000165637 | |nearest_ensembl=ENSG00000165637 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184823 |
|nearest_refseq=NM_003375 | |nearest_refseq=NM_003375 | ||
|nearest_unigene=Hs.355927 | |nearest_unigene=Hs.355927 | ||
| − | |num_trans= | + | |num_trans=6229 |
|species=human | |species=human | ||
| − | |start= | + | |start=78033815 |
|start_of_center_position=78033815 | |start_of_center_position=78033815 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645440.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232396.1 | |tss_id=hg_232396.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A2R8Y849 |
}} | }} | ||
Latest revision as of 11:09, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 78033815 |
|---|---|
| End of the center position in the TSS region: | 78033816 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645440.1 |
|---|---|
| Distance: | 20 |
| Num_trans: | 6229 |
| All_trans: | HGNC:10411 |
TATA-Box annotation
| Distance to TSS: | 701 |
|---|---|
| Nearest PromoterID: | NM_001184823 |
| Entrez ID: | 7417 |
| Nearest Unigene: | Hs.355927 |
| Nearest Refseq: | NM_003375 |
| Nearest Ensembl: | ENSG00000165637 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | POR |
| Gene Description: | voltage dependent anion channel 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
