Difference between revisions of "TSS:Hg 232884.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.035 |distance= |distance_to_tss=3430 |end=2130781 |entrez_id=619552 |gc_percent=0.626866 |gene_alias=MIRN483|hsa-mir-483|mir-483 |gene_de...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:17693 |
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=-415 |
|distance_to_tss=3430 | |distance_to_tss=3430 | ||
| − | |end= | + | |end=12616281 |
| + | |end_of_center_position=12616275 | ||
|entrez_id=619552 | |entrez_id=619552 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=MIRN483 | + | |gene_alias=MIRN483{{!}}hsa-mir-483{{!}}mir-483 |
|gene_description=microRNA 483 | |gene_description=microRNA 483 | ||
| − | |gene_name= | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
| + | |hsa-mir-483= | ||
| + | |mir-483= | ||
|nearest_ensembl=ENSG00000207805 | |nearest_ensembl=ENSG00000207805 | ||
|nearest_promoter_id=NR_030158 | |nearest_promoter_id=NR_030158 | ||
|nearest_refseq=NR_030158 | |nearest_refseq=NR_030158 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=9249 |
|species=human | |species=human | ||
| − | |start= | + | |start=12616268 |
| + | |start_of_center_position=12616274 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000482265.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_232884.1 | |tss_id=hg_232884.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:20, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 12616274 |
|---|---|
| End of the center position in the TSS region: | 12616275 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000482265.1 |
|---|---|
| Distance: | -415 |
| Num_trans: | 9249 |
| All_trans: | HGNC:17693 |
TATA-Box annotation
| Distance to TSS: | 3430 |
|---|---|
| Nearest PromoterID: | NR_030158 |
| Entrez ID: | 619552 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030158 |
| Nearest Ensembl: | ENSG00000207805 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | MIRN483|hsa-mir-483|mir-483 |
| Gene Description: | microRNA 483 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
