Difference between revisions of "TSS:Hg 23305.1"
From referenceTSS
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| Line 2: | Line 2: | ||
|ITRAF= | |ITRAF= | ||
|TRAF2= | |TRAF2= | ||
| − | |all_trans= | + | |all_trans=HGNC:11562 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 11: | Line 11: | ||
|entrez_id=10010 | |entrez_id=10010 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=I-TRAF | + | |gene_alias=I-TRAF{{!}}ITRAF{{!}}TRAF2 |
|gene_description=TRAF family member associated NFKB activator | |gene_description=TRAF family member associated NFKB activator | ||
|gene_id=10010 | |gene_id=10010 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_004180 | |nearest_refseq=NM_004180 | ||
|nearest_unigene=Hs.132257 | |nearest_unigene=Hs.132257 | ||
| − | |num_trans= | + | |num_trans=10010 |
|species=human | |species=human | ||
|start=161160405 | |start=161160405 | ||
|start_of_center_position=161160424 | |start_of_center_position=161160424 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000457887.5 ENST00000477952.1 ENST00000441987.5 ENST00000432692.6 ENST00000494976.1 ENST00000405852.5 | + | |transcript_name=ENST00000457887.5 ENST00000477952.1 ENST00000441987.5 ENST00000432692.6 ENST00000392749.7 ENST00000494976.1 ENST00000405852.5 AK313096 BC067779 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_23305.1 | |tss_id=hg_23305.1 | ||
Latest revision as of 11:23, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 161160424 |
|---|---|
| End of the center position in the TSS region: | 161160425 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000457887.5 ENST00000477952.1 ENST00000441987.5 ENST00000432692.6 ENST00000392749.7 ENST00000494976.1 ENST00000405852.5 AK313096 BC067779 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10010 |
| All_trans: | HGNC:11562 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001199135 |
| Entrez ID: | 10010 |
| Nearest Unigene: | Hs.132257 |
| Nearest Refseq: | NM_004180 |
| Nearest Ensembl: | ENSG00000136560 |
| Gene Name: | TRAF family member associated NFKB activator |
| Gene Alias: | I-TRAF|ITRAF|TRAF2 |
| Gene Description: | TRAF family member associated NFKB activator |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
