Difference between revisions of "TSS:Hg 233275.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_001377301:276 ENST00000679176.1:283 ENST00000367993.7:286 NM_004550:286 BC008868:286 |
| − | |chr= | + | |chr=chr1 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=276 |
| − | |distance_to_tss= | + | |distance_to_tss=106 |
| − | |end= | + | |end=161199029 |
| + | |end_of_center_position=161199028 | ||
|entrez_id=120793 | |entrez_id=120793 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
|gene_alias=OR11-49 | |gene_alias=OR11-49 | ||
|gene_description=olfactory receptor family 56 subfamily A member 4 | |gene_description=olfactory receptor family 56 subfamily A member 4 | ||
| − | |gene_id= | + | |gene_id=4720 |
| − | |gene_name= | + | |gene_name=NADH:ubiquinone oxidoreductase core subunit S2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:7708 |
| − | |gene_symbol= | + | |gene_symbol=NDUFS2 |
| − | |gene_synonyms= | + | |gene_synonyms=CI-49 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:7708 |
|nearest_ensembl=ENSG00000183389 | |nearest_ensembl=ENSG00000183389 | ||
|nearest_promoter_id=NM_001005179 | |nearest_promoter_id=NM_001005179 | ||
|nearest_refseq=NM_001005179 | |nearest_refseq=NM_001005179 | ||
|nearest_unigene=Hs.553571 | |nearest_unigene=Hs.553571 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
| − | |start= | + | |start=161199025 |
| − | |strand= | + | |start_of_center_position=161199027 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=NM_001377301.1 |
| + | |tss_classification=yes | ||
|tss_id=hg_233275.1 | |tss_id=hg_233275.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 11:28, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 161199027 |
|---|---|
| End of the center position in the TSS region: | 161199028 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001377301.1 |
|---|---|
| Distance: | 276 |
| Num_trans: | 5 |
| All_trans: | NM_001377301:276 ENST00000679176.1:283 ENST00000367993.7:286 NM_004550:286 BC008868:286 |
TATA-Box annotation
| Distance to TSS: | 106 |
|---|---|
| Nearest PromoterID: | NM_001005179 |
| Entrez ID: | 120793 |
| Nearest Unigene: | Hs.553571 |
| Nearest Refseq: | NM_001005179 |
| Nearest Ensembl: | ENSG00000183389 |
| Gene Name: | NADH:ubiquinone oxidoreductase core subunit S2 |
| Gene Alias: | OR11-49 |
| Gene Description: | olfactory receptor family 56 subfamily A member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
