Difference between revisions of "TSS:Hg 234703.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:44158 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-106 | |distance=-106 | ||
|distance_to_tss=7286 | |distance_to_tss=7286 | ||
| − | |end= | + | |end=98516064 |
|end_of_center_position=98516063 | |end_of_center_position=98516063 | ||
|entrez_id=144571 | |entrez_id=144571 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_026971 | |nearest_refseq=NR_026971 | ||
|nearest_unigene=Hs.592432 | |nearest_unigene=Hs.592432 | ||
| − | |num_trans= | + | |num_trans=100128191 |
|species=human | |species=human | ||
| − | |start= | + | |start=98516061 |
|start_of_center_position=98516062 | |start_of_center_position=98516062 | ||
| − | |strand= | + | |strand=- |
|tata_box=-10(CCTTTTCTGGGA,+,0.00) | |tata_box=-10(CCTTTTCTGGGA,+,0.00) | ||
|transcript_name=BC067862 | |transcript_name=BC067862 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_234703.1 | |tss_id=hg_234703.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 11:59, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 98516062 |
|---|---|
| End of the center position in the TSS region: | 98516063 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC067862 |
|---|---|
| Distance: | -106 |
| Num_trans: | 100128191 |
| All_trans: | HGNC:44158 |
TATA-Box annotation
| Distance to TSS: | 7286 |
|---|---|
| Nearest PromoterID: | NR_137425 |
| Entrez ID: | 144571 |
| Nearest Unigene: | Hs.592432 |
| Nearest Refseq: | NR_026971 |
| Nearest Ensembl: | ENSG00000245105 |
| Gene Name: | TMPO antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | A2M antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -10(CCTTTTCTGGGA,+,0.00) |
