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Difference between revisions of "TSS:Hg 236110.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000537245.6:28 AK294875:28 NM_001265592:-107 AK125550:-266 NM_001042663:-288 AB018263:-288 ENST00000400915.8:-300 ENST00000377732.5:428 BC042606:428
+
|all_trans=HGNC:29105
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.095
 
|cpg_percent=0.095
Line 22: Line 22:
 
|nearest_refseq=NM_001014999
 
|nearest_refseq=NM_001014999
 
|nearest_unigene=Hs.729791
 
|nearest_unigene=Hs.729791
|num_trans=9
+
|num_trans=57449
 
|species=human
 
|species=human
 
|start=6497123
 
|start=6497123

Latest revision as of 12:30, 21 July 2021

Basic information about the TSS


TSS ID:hg_236110.1
Species:human
Chr:chr1
TSS Classification:yes
Start:6497123
End:6497124
Strand:-
TSS Score:1
Start of the center position in the TSS region:6497123
End of the center position in the TSS region:6497124



Gene and protein annotation


Transcript_name:ENST00000537245.6 AK294875
Distance:28
GeneID:57449
HGNC/MGI_ID:HGNC:29105
UniProt_ID:O94827
Gene_name:pleckstrin homology and RhoGEF domain containing G5
Gene_symbol:PLEKHG5
Gene_synonyms:GEF720 KIAA0720 Syx Tech
Gene_source:HGNC:29105



Transcript annotation


Transcript_name:ENST00000537245.6 AK294875
Distance:28
Num_trans:57449
All_trans:HGNC:29105



TATA-Box annotation


Distance to TSS:1
Nearest PromoterID:NM_001015000
Entrez ID:548593
Nearest Unigene:Hs.729791
Nearest Refseq:NM_001014999
Nearest Ensembl:ENSG00000132207
Gene Name:pleckstrin homology and RhoGEF domain containing G5
Gene Alias:GIYD1
Gene Description:SLX1 homolog A, structure-specific endonuclease subunit
Gene Type:protein-coding
CpG%:0.095
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):