Difference between revisions of "TSS:Hg 236837.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|PDKII= | |PDKII= | ||
| − | |all_trans= | + | |all_trans=HGNC:28565 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=5 | |distance=5 | ||
|distance_to_tss=-4336 | |distance_to_tss=-4336 | ||
| − | |end= | + | |end=6776248 |
|end_of_center_position=6776248 | |end_of_center_position=6776248 | ||
|entrez_id=5164 | |entrez_id=5164 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002611 | |nearest_refseq=NM_002611 | ||
|nearest_unigene=Hs.256667 | |nearest_unigene=Hs.256667 | ||
| − | |num_trans= | + | |num_trans=162517 |
|species=human | |species=human | ||
| − | |start= | + | |start=6776247 |
|start_of_center_position=6776247 | |start_of_center_position=6776247 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC034782 | |transcript_name=BC034782 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_236837.1 | |tss_id=hg_236837.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q8N4B4 | |uniprot_id=Q8N4B4 | ||
}} | }} | ||
Latest revision as of 12:46, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 6776247 |
|---|---|
| End of the center position in the TSS region: | 6776248 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC034782 |
|---|---|
| Distance: | 5 |
| Num_trans: | 162517 |
| All_trans: | HGNC:28565 |
TATA-Box annotation
| Distance to TSS: | -4336 |
|---|---|
| Nearest PromoterID: | NM_001199898 |
| Entrez ID: | 5164 |
| Nearest Unigene: | Hs.256667 |
| Nearest Refseq: | NM_002611 |
| Nearest Ensembl: | ENSG00000005882 |
| Gene Name: | F-box protein 39 |
| Gene Alias: | PDHK2|PDKII |
| Gene Description: | pyruvate dehydrogenase kinase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
