Difference between revisions of "TSS:Hg 236952.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:26794 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=98 | |distance=98 | ||
|distance_to_tss=-79 | |distance_to_tss=-79 | ||
| − | |end= | + | |end=81330527 |
|end_of_center_position=81330527 | |end_of_center_position=81330527 | ||
|entrez_id=786 | |entrez_id=786 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000727 | |nearest_refseq=NM_000727 | ||
|nearest_unigene=Hs.147989 | |nearest_unigene=Hs.147989 | ||
| − | |num_trans= | + | |num_trans=284186 |
|species=human | |species=human | ||
| − | |start= | + | |start=81330526 |
|start_of_center_position=81330526 | |start_of_center_position=81330526 | ||
| − | |strand= | + | |strand=- |
|tata_box=-43(GCATTAATAGCA,+,0.00) | |tata_box=-43(GCATTAATAGCA,+,0.00) | ||
|transcript_name=ENST00000571868.1 | |transcript_name=ENST00000571868.1 | ||
Latest revision as of 12:49, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 81330526 |
|---|---|
| End of the center position in the TSS region: | 81330527 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000571868.1 |
|---|---|
| Distance: | 98 |
| Num_trans: | 284186 |
| All_trans: | HGNC:26794 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | TMEM105 long non-coding RNA |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -43(GCATTAATAGCA,+,0.00) |
