Difference between revisions of "TSS:Hg 237072.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7870 |
| − | |chr= | + | |chr=chr18 |
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=-3 |
| − | |distance_to_tss= | + | |distance_to_tss=-21279 |
| − | |end= | + | |end=34048591 |
| − | |entrez_id= | + | |end_of_center_position=34048591 |
| + | |entrez_id=284185 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias= | + | |gene_alias=C17orf55 |
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 482 |
| − | |gene_id= | + | |gene_id=8715 |
| − | |gene_name= | + | |gene_name=nucleolar protein 4 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:7870 |
| − | |gene_symbol= | + | |gene_symbol=NOL4 |
| − | |gene_synonyms= | + | |gene_synonyms=CT125 HRIHFB2255 NOLP |
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:7870 |
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038080 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_178519 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.631762 |
| − | |num_trans= | + | |num_trans=8715 |
|species=human | |species=human | ||
| − | |start= | + | |start=34048590 |
| + | |start_of_center_position=34048590 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000535384.5 AK296539 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_237072.1 | |tss_id=hg_237072.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=O94818 |
}} | }} | ||
Latest revision as of 12:51, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34048590 |
|---|---|
| End of the center position in the TSS region: | 34048591 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000535384.5 AK296539 |
|---|---|
| Distance: | -3 |
| Num_trans: | 8715 |
| All_trans: | HGNC:7870 |
TATA-Box annotation
| Distance to TSS: | -21279 |
|---|---|
| Nearest PromoterID: | NR_038080 |
| Entrez ID: | 284185 |
| Nearest Unigene: | Hs.631762 |
| Nearest Refseq: | NM_178519 |
| Nearest Ensembl: | |
| Gene Name: | nucleolar protein 4 |
| Gene Alias: | C17orf55 |
| Gene Description: | long intergenic non-protein coding RNA 482 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
