Difference between revisions of "TSS:Hg 237098.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=NM_001371319:0 AK122698:45 |
| + | |chr=chr18 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=2440 | |distance_to_tss=2440 | ||
| − | |end= | + | |end=45167963 |
| + | |end_of_center_position=45167963 | ||
|entrez_id=102465472 | |entrez_id=102465472 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
|gene_alias=hsa-mir-6787 | |gene_alias=hsa-mir-6787 | ||
|gene_description=microRNA 6787 | |gene_description=microRNA 6787 | ||
| − | |gene_name= | + | |gene_id=8170 |
| + | |gene_name=solute carrier family 14 member 2 | ||
| + | |gene_source=HGNC:10919 | ||
| + | |gene_symbol=SLC14A2 | ||
| + | |gene_synonyms=HUT2 UT2 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:10919 |
| + | |nearest_ensembl=ENSG00000284574 | ||
|nearest_promoter_id=NR_106845 | |nearest_promoter_id=NR_106845 | ||
|nearest_refseq=NR_106845 | |nearest_refseq=NR_106845 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
| − | |start= | + | |start=45167962 |
| − | |strand= | + | |start_of_center_position=45167962 |
| − | |transcript_name= | + | |strand=+ |
| + | |transcript_name=NM_001371319.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_237098.1 | |tss_id=hg_237098.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 12:52, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 45167962 |
|---|---|
| End of the center position in the TSS region: | 45167963 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001371319.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | NM_001371319:0 AK122698:45 |
TATA-Box annotation
| Distance to TSS: | 2440 |
|---|---|
| Nearest PromoterID: | NR_106845 |
| Entrez ID: | 102465472 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106845 |
| Nearest Ensembl: | ENSG00000284574 |
| Gene Name: | solute carrier family 14 member 2 |
| Gene Alias: | hsa-mir-6787 |
| Gene Description: | microRNA 6787 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
