Difference between revisions of "TSS:Hg 237597.1"
From referenceTSS
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|CLIPR59= | |CLIPR59= | ||
|RSNL1= | |RSNL1= | ||
| − | |all_trans= | + | |all_trans=HGNC:11159 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=-76 | |distance=-76 | ||
|distance_to_tss=68 | |distance_to_tss=68 | ||
| − | |end= | + | |end=45692240 |
|end_of_center_position=45692240 | |end_of_center_position=45692240 | ||
|entrez_id=25999 | |entrez_id=25999 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_015526 | |nearest_refseq=NM_015526 | ||
|nearest_unigene=Hs.466539 | |nearest_unigene=Hs.466539 | ||
| − | |num_trans= | + | |num_trans=6633 |
|species=human | |species=human | ||
| − | |start= | + | |start=45692239 |
|start_of_center_position=45692239 | |start_of_center_position=45692239 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000588301.5 | + | |transcript_name=ENST00000588301.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_237597.1 | |tss_id=hg_237597.1 | ||
Latest revision as of 13:03, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 45692239 |
|---|---|
| End of the center position in the TSS region: | 45692240 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000588301.5 |
|---|---|
| Distance: | -76 |
| Num_trans: | 6633 |
| All_trans: | HGNC:11159 |
TATA-Box annotation
| Distance to TSS: | 68 |
|---|---|
| Nearest PromoterID: | NM_001199570 |
| Entrez ID: | 25999 |
| Nearest Unigene: | Hs.466539 |
| Nearest Refseq: | NM_015526 |
| Nearest Ensembl: | ENSG00000105270 |
| Gene Name: | small nuclear ribonucleoprotein D2 polypeptide |
| Gene Alias: | CLIPR-59|CLIPR59|RSNL1 |
| Gene Description: | CAP-Gly domain containing linker protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
