Difference between revisions of "TSS:Hg 242512.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:379 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=51 |
|distance_to_tss=-13 | |distance_to_tss=-13 | ||
| − | |end= | + | |end=92070087 |
|end_of_center_position=92070087 | |end_of_center_position=92070087 | ||
|entrez_id=2115 | |entrez_id=2115 | ||
| Line 11: | Line 11: | ||
|gene_alias=ER81 | |gene_alias=ER81 | ||
|gene_description=ETS variant 1 | |gene_description=ETS variant 1 | ||
| − | |gene_id= | + | |gene_id=10142 |
| − | |gene_name= | + | |gene_name=A-kinase anchoring protein 9 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:379 |
| − | |gene_symbol= | + | |gene_symbol=AKAP9 |
| − | |gene_synonyms= | + | |gene_synonyms=AKAP350 AKAP450 CG-NAP HYPERION KIAA0803 LQT11 MU-RMS-40.16A PPP1R45 PRKA9 YOTIAO |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:379 |
|nearest_ensembl=ENSG00000006468 | |nearest_ensembl=ENSG00000006468 | ||
|nearest_promoter_id=NM_001163148 | |nearest_promoter_id=NM_001163148 | ||
|nearest_refseq=NM_004956 | |nearest_refseq=NM_004956 | ||
|nearest_unigene=Hs.22634 | |nearest_unigene=Hs.22634 | ||
| − | |num_trans= | + | |num_trans=10142 |
|species=human | |species=human | ||
| − | |start= | + | |start=92070086 |
|start_of_center_position=92070086 | |start_of_center_position=92070086 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=AF091711 |
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_242512.1 | |tss_id=hg_242512.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 14:49, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 92070086 |
|---|---|
| End of the center position in the TSS region: | 92070087 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF091711 |
|---|---|
| Distance: | 51 |
| Num_trans: | 10142 |
| All_trans: | HGNC:379 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_001163148 |
| Entrez ID: | 2115 |
| Nearest Unigene: | Hs.22634 |
| Nearest Refseq: | NM_004956 |
| Nearest Ensembl: | ENSG00000006468 |
| Gene Name: | A-kinase anchoring protein 9 |
| Gene Alias: | ER81 |
| Gene Description: | ETS variant 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
