Difference between revisions of "TSS:Hg 242514.1"
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{{TSSDetail | {{TSSDetail | ||
|KIAA1277= | |KIAA1277= | ||
| − | |all_trans= | + | |all_trans=NR_122109:114 NR_122110:114 BC042829:143 ENST00000453068.1:155 AL133568:155 ENST00000653494.1:385 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=114 |
|distance_to_tss=112 | |distance_to_tss=112 | ||
| − | |end= | + | |end=92134449 |
|end_of_center_position=92134448 | |end_of_center_position=92134448 | ||
|entrez_id=27147 | |entrez_id=27147 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=FAM31D | + | |gene_alias=FAM31D{{!}}KIAA1277 |
|gene_description=DENN domain containing 2A | |gene_description=DENN domain containing 2A | ||
| − | |gene_id= | + | |gene_id=613126 |
| − | |gene_name= | + | |gene_name=CYP51A1 antisense RNA 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:50694 |
| − | |gene_symbol= | + | |gene_symbol=CYP51A1-AS1 |
| − | |gene_synonyms= | + | |gene_synonyms=ENST00000453068 LRRD1-AS1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:50694 |
|nearest_ensembl=ENSG00000146966 | |nearest_ensembl=ENSG00000146966 | ||
|nearest_promoter_id=NR_134477 | |nearest_promoter_id=NR_134477 | ||
|nearest_refseq=NM_015689 | |nearest_refseq=NM_015689 | ||
|nearest_unigene=Hs.6385 | |nearest_unigene=Hs.6385 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
| − | |start= | + | |start=92134445 |
|start_of_center_position=92134447 | |start_of_center_position=92134447 | ||
| − | |strand= | + | |strand=+ |
| − | |transcript_name= | + | |transcript_name=NR_122110.1 NR_122109.1 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242514.1 | |tss_id=hg_242514.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 14:49, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 92134447 |
|---|---|
| End of the center position in the TSS region: | 92134448 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_122110.1 NR_122109.1 |
|---|---|
| Distance: | 114 |
| Num_trans: | 6 |
| All_trans: | NR_122109:114 NR_122110:114 BC042829:143 ENST00000453068.1:155 AL133568:155 ENST00000653494.1:385 |
TATA-Box annotation
| Distance to TSS: | 112 |
|---|---|
| Nearest PromoterID: | NR_134477 |
| Entrez ID: | 27147 |
| Nearest Unigene: | Hs.6385 |
| Nearest Refseq: | NM_015689 |
| Nearest Ensembl: | ENSG00000146966 |
| Gene Name: | CYP51A1 antisense RNA 1 |
| Gene Alias: | FAM31D|KIAA1277 |
| Gene Description: | DENN domain containing 2A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
