Difference between revisions of "TSS:Hg 242518.1"
From referenceTSS
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|SOSS-B1= | |SOSS-B1= | ||
|SSBP= | |SSBP= | ||
| + | |all_trans=HGNC:16486 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=-60 |
|distance_to_tss=11720 | |distance_to_tss=11720 | ||
| − | |end= | + | |end=927156 |
|end_of_center_position=927156 | |end_of_center_position=927156 | ||
|entrez_id=6742 | |entrez_id=6742 | ||
|gc_percent=0.318408 | |gc_percent=0.318408 | ||
| − | |gene_alias=Mt-SSB | + | |gene_alias=Mt-SSB{{!}}SOSS-B1{{!}}SSBP{{!}}mtSSB |
|gene_description=single stranded DNA binding protein 1 | |gene_description=single stranded DNA binding protein 1 | ||
| − | |gene_name= | + | |gene_id=11033 |
| + | |gene_name=ArfGAP with dual PH domains 1 | ||
| + | |gene_source=HGNC:16486 | ||
| + | |gene_symbol=ADAP1 | ||
| + | |gene_synonyms=GCS1L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16486 | ||
|mtSSB= | |mtSSB= | ||
|nearest_ensembl=ENSG00000106028 | |nearest_ensembl=ENSG00000106028 | ||
| Line 19: | Line 25: | ||
|nearest_refseq=NM_003143 | |nearest_refseq=NM_003143 | ||
|nearest_unigene=Hs.490394 | |nearest_unigene=Hs.490394 | ||
| − | |num_trans= | + | |num_trans=11033 |
|species=human | |species=human | ||
| − | |start= | + | |start=927155 |
|start_of_center_position=927155 | |start_of_center_position=927155 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000449296.6 ENST00000446141.5 AK092471 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_242518.1 | |tss_id=hg_242518.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=H0Y7Q1 O75689 | ||
}} | }} | ||
Latest revision as of 14:49, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 927155 |
|---|---|
| End of the center position in the TSS region: | 927156 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000449296.6 ENST00000446141.5 AK092471 |
|---|---|
| Distance: | -60 |
| Num_trans: | 11033 |
| All_trans: | HGNC:16486 |
TATA-Box annotation
| Distance to TSS: | 11720 |
|---|---|
| Nearest PromoterID: | NM_001256510 |
| Entrez ID: | 6742 |
| Nearest Unigene: | Hs.490394 |
| Nearest Refseq: | NM_003143 |
| Nearest Ensembl: | ENSG00000106028 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | Mt-SSB|SOSS-B1|SSBP|mtSSB |
| Gene Description: | single stranded DNA binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.318408 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
