Difference between revisions of "TSS:Hg 242731.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PS1TP5BP1= | |PS1TP5BP1= | ||
| − | |chr= | + | |all_trans=HGNC:8727 |
| + | |chr=chr8 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance= | + | |distance=-49 |
|distance_to_tss=1399 | |distance_to_tss=1399 | ||
| − | |end= | + | |end=17969624 |
|end_of_center_position=17969624 | |end_of_center_position=17969624 | ||
|entrez_id=60 | |entrez_id=60 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=BRWS1 | + | |gene_alias=BRWS1{{!}}PS1TP5BP1 |
|gene_description=actin beta | |gene_description=actin beta | ||
| − | |gene_name= | + | |gene_id=5108 |
| + | |gene_name=pericentriolar material 1 | ||
| + | |gene_source=HGNC:8727 | ||
| + | |gene_symbol=PCM1 | ||
| + | |gene_synonyms=PTC4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8727 | ||
|nearest_ensembl=ENSG00000075624 | |nearest_ensembl=ENSG00000075624 | ||
|nearest_promoter_id=NM_001101 | |nearest_promoter_id=NM_001101 | ||
|nearest_refseq=NM_001101 | |nearest_refseq=NM_001101 | ||
|nearest_unigene=Hs.520640 | |nearest_unigene=Hs.520640 | ||
| − | |num_trans= | + | |num_trans=5108 |
|species=human | |species=human | ||
| − | |start= | + | |start=17969623 |
|start_of_center_position=17969623 | |start_of_center_position=17969623 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK295856 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_242731.1 | |tss_id=hg_242731.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=B4DJ00 | ||
}} | }} | ||
Latest revision as of 14:53, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17969623 |
|---|---|
| End of the center position in the TSS region: | 17969624 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK295856 |
|---|---|
| Distance: | -49 |
| Num_trans: | 5108 |
| All_trans: | HGNC:8727 |
TATA-Box annotation
| Distance to TSS: | 1399 |
|---|---|
| Nearest PromoterID: | NM_001101 |
| Entrez ID: | 60 |
| Nearest Unigene: | Hs.520640 |
| Nearest Refseq: | NM_001101 |
| Nearest Ensembl: | ENSG00000075624 |
| Gene Name: | pericentriolar material 1 |
| Gene Alias: | BRWS1|PS1TP5BP1 |
| Gene Description: | actin beta |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
