Difference between revisions of "TSS:Hg 242795.1"
From referenceTSS
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| Line 5: | Line 5: | ||
|WBSCR5= | |WBSCR5= | ||
|WSCR5= | |WSCR5= | ||
| − | |all_trans= | + | |all_trans=HGNC:11738 |
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-8 | |distance=-8 | ||
|distance_to_tss=-149 | |distance_to_tss=-149 | ||
| − | |end= | + | |end=30849009 |
|end_of_center_position=30849009 | |end_of_center_position=30849009 | ||
|entrez_id=7462 | |entrez_id=7462 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_014146 | |nearest_refseq=NM_014146 | ||
|nearest_unigene=Hs.741249 | |nearest_unigene=Hs.741249 | ||
| − | |num_trans= | + | |num_trans=56154 |
|species=human | |species=human | ||
| − | |start= | + | |start=30849008 |
|start_of_center_position=30849008 | |start_of_center_position=30849008 | ||
| − | |strand= | + | |strand=- |
|transcript_name=ENST00000256246.5 AF285605 | |transcript_name=ENST00000256246.5 AF285605 | ||
| − | |tss_classification= | + | |tss_classification=no |
|tss_id=hg_242795.1 | |tss_id=hg_242795.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9BXT5 | |uniprot_id=Q9BXT5 | ||
}} | }} | ||
Latest revision as of 14:55, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30849008 |
|---|---|
| End of the center position in the TSS region: | 30849009 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000256246.5 AF285605 |
|---|---|
| Distance: | -8 |
| Num_trans: | 56154 |
| All_trans: | HGNC:11738 |
TATA-Box annotation
| Distance to TSS: | -149 |
|---|---|
| Nearest PromoterID: | NM_032463 |
| Entrez ID: | 7462 |
| Nearest Unigene: | Hs.741249 |
| Nearest Refseq: | NM_014146 |
| Nearest Ensembl: | ENSG00000086730 |
| Gene Name: | testis expressed 15, meiosis and synapsis associated |
| Gene Alias: | HSPC046|LAB|NTAL|WBSCR15|WBSCR5|WSCR5 |
| Gene Description: | linker for activation of T cells family member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
