Difference between revisions of "TSS:Hg 242850.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |GCS1L= |
| − | |chr= | + | |all_trans=HGNC:12495 |
| + | |chr=chr8 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance=- | + | |distance=-278 |
|distance_to_tss=60 | |distance_to_tss=60 | ||
| − | |end= | + | |end=48049873 |
| + | |end_of_center_position=48049866 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
| − | |gene_id= | + | |gene_id=7336 |
| − | |gene_name= | + | |gene_name=ubiquitin conjugating enzyme E2 V2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:12495 |
| − | |gene_symbol= | + | |gene_symbol=UBE2V2 |
| − | |gene_synonyms= | + | |gene_synonyms=DDVIT1 DDVit-1 EDAF-1 EDPF-1 EDPF1 MMS2 UEV-2 UEV2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:12495 |
|nearest_ensembl=ENSG00000105963 | |nearest_ensembl=ENSG00000105963 | ||
|nearest_promoter_id=NM_001284310 | |nearest_promoter_id=NM_001284310 | ||
|nearest_refseq=NM_006869 | |nearest_refseq=NM_006869 | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
| − | |num_trans= | + | |num_trans=7336 |
| + | |p42IP4= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=48049857 |
| − | |strand= | + | |start_of_center_position=48049865 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=ENST00000521628.1 |
| + | |tss_classification=no | ||
|tss_id=hg_242850.1 | |tss_id=hg_242850.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 14:56, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 48049865 |
|---|---|
| End of the center position in the TSS region: | 48049866 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000521628.1 |
|---|---|
| Distance: | -278 |
| Num_trans: | 7336 |
| All_trans: | HGNC:12495 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001284310 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ubiquitin conjugating enzyme E2 V2 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
