Difference between revisions of "TSS:Hg 242895.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:10812 |
| − | |chr= | + | |chr=chr8 |
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=36 |
|distance_to_tss=101 | |distance_to_tss=101 | ||
| − | |end= | + | |end=66712382 |
| + | |end_of_center_position=66712382 | ||
|entrez_id=81392 | |entrez_id=81392 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=OR2AE2 | |gene_alias=OR2AE2 | ||
|gene_description=olfactory receptor family 2 subfamily AE member 1 | |gene_description=olfactory receptor family 2 subfamily AE member 1 | ||
| − | |gene_id= | + | |gene_id=23678 |
| − | |gene_name= | + | |gene_name=serum/glucocorticoid regulated kinase family member 3 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:10812 |
| − | |gene_symbol= | + | |gene_symbol=SGK3 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:10812 |
|nearest_ensembl=ENSG00000244623 | |nearest_ensembl=ENSG00000244623 | ||
|nearest_promoter_id=NM_001005276 | |nearest_promoter_id=NM_001005276 | ||
|nearest_refseq=NM_001005276 | |nearest_refseq=NM_001005276 | ||
|nearest_unigene=Hs.647523 | |nearest_unigene=Hs.647523 | ||
| − | |num_trans= | + | |num_trans=23678 |
|species=human | |species=human | ||
| − | |start= | + | |start=66712381 |
| − | |strand= | + | |start_of_center_position=66712381 |
| − | |transcript_name= | + | |strand=+ |
| − | |tss_classification= | + | |transcript_name=AK291428 |
| + | |tss_classification=yes | ||
|tss_id=hg_242895.1 | |tss_id=hg_242895.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 14:57, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 66712381 |
|---|---|
| End of the center position in the TSS region: | 66712382 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK291428 |
|---|---|
| Distance: | 36 |
| Num_trans: | 23678 |
| All_trans: | HGNC:10812 |
TATA-Box annotation
| Distance to TSS: | 101 |
|---|---|
| Nearest PromoterID: | NM_001005276 |
| Entrez ID: | 81392 |
| Nearest Unigene: | Hs.647523 |
| Nearest Refseq: | NM_001005276 |
| Nearest Ensembl: | ENSG00000244623 |
| Gene Name: | serum/glucocorticoid regulated kinase family member 3 |
| Gene Alias: | OR2AE2 |
| Gene Description: | olfactory receptor family 2 subfamily AE member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
