Difference between revisions of "TSS:Hg 243033.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |SCRB1= |
| − | |chr= | + | |SCRIB1= |
| + | |Vartul= | ||
| + | |all_trans=HGNC:19818 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance=- | + | |distance=-12 |
| − | |distance_to_tss= | + | |distance_to_tss=464 |
| − | |end= | + | |end=109320726 |
| + | |end_of_center_position=109320726 | ||
|entrez_id=23513 | |entrez_id=23513 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=CRIB1 | + | |gene_alias=CRIB1{{!}}SCRB1{{!}}SCRIB1{{!}}Vartul |
| − | |gene_description= | + | |gene_description=scribble planar cell polarity protein |
| − | |gene_id= | + | |gene_id=54566 |
| − | |gene_name= | + | |gene_name=erythrocyte membrane protein band 4.1 like 4B |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:19818 |
| − | |gene_symbol= | + | |gene_symbol=EPB41L4B |
| − | |gene_synonyms= | + | |gene_synonyms=EHM2 LULU2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:19818 |
|nearest_ensembl=ENSG00000180900 | |nearest_ensembl=ENSG00000180900 | ||
|nearest_promoter_id=NM_182706 | |nearest_promoter_id=NM_182706 | ||
|nearest_refseq=NM_015356 | |nearest_refseq=NM_015356 | ||
|nearest_unigene=Hs.436329 | |nearest_unigene=Hs.436329 | ||
| − | |num_trans= | + | |num_trans=54566 |
|species=human | |species=human | ||
| − | |start= | + | |start=109320725 |
| + | |start_of_center_position=109320725 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AF153416 AF153418 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243033.1 | |tss_id=hg_243033.1 | ||
Latest revision as of 15:00, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109320725 |
|---|---|
| End of the center position in the TSS region: | 109320726 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF153416 AF153418 |
|---|---|
| Distance: | -12 |
| Num_trans: | 54566 |
| All_trans: | HGNC:19818 |
TATA-Box annotation
| Distance to TSS: | 464 |
|---|---|
| Nearest PromoterID: | NM_182706 |
| Entrez ID: | 23513 |
| Nearest Unigene: | Hs.436329 |
| Nearest Refseq: | NM_015356 |
| Nearest Ensembl: | ENSG00000180900 |
| Gene Name: | erythrocyte membrane protein band 4.1 like 4B |
| Gene Alias: | CRIB1|SCRB1|SCRIB1|Vartul |
| Gene Description: | scribble planar cell polarity protein |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
