Difference between revisions of "TSS:Hg 243056.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC039253:75 NM_016353:-120 AB023584:-120 KJ904748:277 ENST00000262096.12:-418 uc003wxe.4:-418 BC050272:-418 |chr=chr8 |cpg_percent=0.16 |distance=75 |di...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ZNF372= |
| − | |chr= | + | |all_trans=HGNC:453 |
| + | |chr=chr9 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| − | |distance= | + | |distance=-49 |
| − | |distance_to_tss= | + | |distance_to_tss=-35 |
| − | |end= | + | |end=114060999 |
| + | |end_of_center_position=114060993 | ||
|entrez_id=51201 | |entrez_id=51201 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=DHHC2 | + | |gene_alias=DHHC2{{!}}ZNF372 |
|gene_description=zinc finger DHHC-type containing 2 | |gene_description=zinc finger DHHC-type containing 2 | ||
| − | |gene_id= | + | |gene_id=259 |
| − | |gene_name= | + | |gene_name=alpha-1-microglobulin/bikunin precursor |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:453 |
| − | |gene_symbol= | + | |gene_symbol=AMBP |
| − | |gene_synonyms= | + | |gene_synonyms=EDC1 HCP HI30 IATIL ITILC UTI |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:453 |
|nearest_ensembl=ENSG00000104219 | |nearest_ensembl=ENSG00000104219 | ||
|nearest_promoter_id=NM_016353 | |nearest_promoter_id=NM_016353 | ||
|nearest_refseq=NM_016353 | |nearest_refseq=NM_016353 | ||
|nearest_unigene=Hs.728241 | |nearest_unigene=Hs.728241 | ||
| − | |num_trans= | + | |num_trans=259 |
|species=human | |species=human | ||
| − | |start= | + | |start=114060985 |
| − | |strand= | + | |start_of_center_position=114060992 |
| − | |transcript_name= | + | |strand=- |
| + | |transcript_name=M11562 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243056.1 | |tss_id=hg_243056.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P78492 |
}} | }} | ||
Latest revision as of 15:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114060992 |
|---|---|
| End of the center position in the TSS region: | 114060993 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | M11562 |
|---|---|
| Distance: | -49 |
| Num_trans: | 259 |
| All_trans: | HGNC:453 |
TATA-Box annotation
| Distance to TSS: | -35 |
|---|---|
| Nearest PromoterID: | NM_016353 |
| Entrez ID: | 51201 |
| Nearest Unigene: | Hs.728241 |
| Nearest Refseq: | NM_016353 |
| Nearest Ensembl: | ENSG00000104219 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | DHHC2|ZNF372 |
| Gene Description: | zinc finger DHHC-type containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
