Difference between revisions of "TSS:Hg 243059.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AY363099:-1 ENST00000381869.5:-41 ENST00000523718.5:-41 NM_001001925:-41 NM_001001924:-41 uc003wxw.4:-41 uc010lsz.4:-41 AK310871:-41 FJ458441:-131 ENST0...") |
|||
| (3 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |ATIP= |
| − | |chr= | + | |ICIS= |
| + | |MP44= | ||
| + | |MTSG1= | ||
| + | |all_trans=HGNC:453 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=10 |
|distance_to_tss=41 | |distance_to_tss=41 | ||
| − | |end= | + | |end=114078341 |
| + | |end_of_center_position=114078340 | ||
|entrez_id=57509 | |entrez_id=57509 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=ATBP | + | |gene_alias=ATBP{{!}}ATIP{{!}}ATIP3{{!}}ICIS{{!}}MP44{{!}}MTSG1 |
| − | |gene_description=microtubule associated | + | |gene_description=microtubule associated scaffold protein 1 |
| − | |gene_id= | + | |gene_id=259 |
| − | |gene_name= | + | |gene_name=alpha-1-microglobulin/bikunin precursor |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:453 |
| − | |gene_symbol= | + | |gene_symbol=AMBP |
| − | |gene_synonyms= | + | |gene_synonyms=EDC1 HCP HI30 IATIL ITILC UTI |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:453 |
|nearest_ensembl=ENSG00000129422 | |nearest_ensembl=ENSG00000129422 | ||
|nearest_promoter_id=NM_001001925 | |nearest_promoter_id=NM_001001925 | ||
|nearest_refseq=NM_020749 | |nearest_refseq=NM_020749 | ||
|nearest_unigene=Hs.7946 | |nearest_unigene=Hs.7946 | ||
| − | |num_trans= | + | |num_trans=259 |
|species=human | |species=human | ||
| − | |start= | + | |start=114078337 |
| + | |start_of_center_position=114078339 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000603230.1 AK310791 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243059.1 | |tss_id=hg_243059.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=S4R3Y4 |
}} | }} | ||
Latest revision as of 15:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114078339 |
|---|---|
| End of the center position in the TSS region: | 114078340 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000603230.1 AK310791 |
|---|---|
| Distance: | 10 |
| Num_trans: | 259 |
| All_trans: | HGNC:453 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_001001925 |
| Entrez ID: | 57509 |
| Nearest Unigene: | Hs.7946 |
| Nearest Refseq: | NM_020749 |
| Nearest Ensembl: | ENSG00000129422 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | ATBP|ATIP|ATIP3|ICIS|MP44|MTSG1 |
| Gene Description: | microtubule associated scaffold protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
