Difference between revisions of "TSS:Hg 243060.1"
From referenceTSS
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|LFIRE-1= | |LFIRE-1= | ||
|LFIRE1= | |LFIRE1= | ||
| − | |chr= | + | |all_trans=HGNC:453 |
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=30743 | |distance_to_tss=30743 | ||
| − | |end= | + | |end=114078400 |
|end_of_center_position=114078399 | |end_of_center_position=114078399 | ||
|entrez_id=2267 | |entrez_id=2267 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
| − | |gene_alias=HFREP1 | + | |gene_alias=HFREP1{{!}}HP-041{{!}}HPS{{!}}LFIRE-1{{!}}LFIRE1 |
|gene_description=fibrinogen like 1 | |gene_description=fibrinogen like 1 | ||
| − | |gene_name= | + | |gene_id=259 |
| + | |gene_name=alpha-1-microglobulin/bikunin precursor | ||
| + | |gene_source=HGNC:453 | ||
| + | |gene_symbol=AMBP | ||
| + | |gene_synonyms=EDC1 HCP HI30 IATIL ITILC UTI | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:453 | ||
|nearest_ensembl=ENSG00000104760 | |nearest_ensembl=ENSG00000104760 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_201553 |
|nearest_refseq=NM_004467 | |nearest_refseq=NM_004467 | ||
|nearest_unigene=Hs.491143 | |nearest_unigene=Hs.491143 | ||
| − | |num_trans= | + | |num_trans=259 |
|species=human | |species=human | ||
| − | |start= | + | |start=114078396 |
|start_of_center_position=114078398 | |start_of_center_position=114078398 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AK310776 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243060.1 | |tss_id=hg_243060.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 15:01, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 114078398 |
|---|---|
| End of the center position in the TSS region: | 114078399 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK310776 |
|---|---|
| Distance: | 0 |
| Num_trans: | 259 |
| All_trans: | HGNC:453 |
TATA-Box annotation
| Distance to TSS: | 30743 |
|---|---|
| Nearest PromoterID: | NM_201553 |
| Entrez ID: | 2267 |
| Nearest Unigene: | Hs.491143 |
| Nearest Refseq: | NM_004467 |
| Nearest Ensembl: | ENSG00000104760 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | HFREP1|HP-041|HPS|LFIRE-1|LFIRE1 |
| Gene Description: | fibrinogen like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
