Difference between revisions of "TSS:Hg 243068.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|RET/PCM-1= | |RET/PCM-1= | ||
| − | |all_trans= | + | |all_trans=HGNC:24108 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=46 | |distance=46 | ||
|distance_to_tss=49369 | |distance_to_tss=49369 | ||
| − | |end= | + | |end=114381514 |
|end_of_center_position=114381514 | |end_of_center_position=114381514 | ||
|entrez_id=5108 | |entrez_id=5108 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006197 | |nearest_refseq=NM_006197 | ||
|nearest_unigene=Hs.491148 | |nearest_unigene=Hs.491148 | ||
| − | |num_trans= | + | |num_trans=80709 |
|species=human | |species=human | ||
| − | |start= | + | |start=114381513 |
|start_of_center_position=114381513 | |start_of_center_position=114381513 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AY703043 | |transcript_name=AY703043 | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114381513 |
|---|---|
| End of the center position in the TSS region: | 114381514 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY703043 |
|---|---|
| Distance: | 46 |
| Num_trans: | 80709 |
| All_trans: | HGNC:24108 |
TATA-Box annotation
| Distance to TSS: | 49369 |
|---|---|
| Nearest PromoterID: | NM_001352656 |
| Entrez ID: | 5108 |
| Nearest Unigene: | Hs.491148 |
| Nearest Refseq: | NM_006197 |
| Nearest Ensembl: | ENSG00000078674 |
| Gene Name: | AT-hook transcription factor |
| Gene Alias: | PTC4|RET/PCM-1 |
| Gene Description: | pericentriolar material 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.328358 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
