Difference between revisions of "TSS:Hg 243083.1"
From referenceTSS
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| Line 4: | Line 4: | ||
|SMDP2= | |SMDP2= | ||
|SP-C= | |SP-C= | ||
| − | |all_trans= | + | |all_trans=HGNC:18672 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-73 | |distance=-73 | ||
|distance_to_tss=918 | |distance_to_tss=918 | ||
| − | |end= | + | |end=120447999 |
|end_of_center_position=120447999 | |end_of_center_position=120447999 | ||
|entrez_id=6440 | |entrez_id=6440 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_003018 | |nearest_refseq=NM_003018 | ||
|nearest_unigene=Hs.1074 | |nearest_unigene=Hs.1074 | ||
| − | |num_trans= | + | |num_trans=55755 |
|species=human | |species=human | ||
| − | |start= | + | |start=120447998 |
|start_of_center_position=120447998 | |start_of_center_position=120447998 | ||
|strand=- | |strand=- | ||
Latest revision as of 15:01, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120447998 |
|---|---|
| End of the center position in the TSS region: | 120447999 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000425647.1 AK001729 |
|---|---|
| Distance: | -73 |
| Num_trans: | 55755 |
| All_trans: | HGNC:18672 |
TATA-Box annotation
| Distance to TSS: | 918 |
|---|---|
| Nearest PromoterID: | NM_001172410 |
| Entrez ID: | 6440 |
| Nearest Unigene: | Hs.1074 |
| Nearest Refseq: | NM_003018 |
| Nearest Ensembl: | ENSG00000168484 |
| Gene Name: | CDK5 regulatory subunit associated protein 2 |
| Gene Alias: | BRICD6|PSP-C|SFTP2|SMDP2|SP-C |
| Gene Description: | surfactant protein C |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
