Difference between revisions of "TSS:Hg 243098.1"
From referenceTSS
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|SCAM1= | |SCAM1= | ||
|SH3D4= | |SH3D4= | ||
| − | |all_trans= | + | |all_trans=HGNC:7983 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=-103 | |distance=-103 | ||
|distance_to_tss=-29472 | |distance_to_tss=-29472 | ||
| − | |end= | + | |end=124503292 |
|end_of_center_position=124503292 | |end_of_center_position=124503292 | ||
|entrez_id=10174 | |entrez_id=10174 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_005775 | |nearest_refseq=NM_005775 | ||
|nearest_unigene=Hs.528572 | |nearest_unigene=Hs.528572 | ||
| − | |num_trans= | + | |num_trans=2516 |
|species=human | |species=human | ||
| − | |start= | + | |start=124503291 |
|start_of_center_position=124503291 | |start_of_center_position=124503291 | ||
| − | |strand= | + | |strand=- |
|transcript_name=AB307718 HQ692856 HQ709184 | |transcript_name=AB307718 HQ692856 HQ709184 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243098.1 | |tss_id=hg_243098.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B6ZGU8 F1D8R8 | |uniprot_id=B6ZGU8 F1D8R8 | ||
}} | }} | ||
Latest revision as of 15:02, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 124503291 |
|---|---|
| End of the center position in the TSS region: | 124503292 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB307718 HQ692856 HQ709184 |
|---|---|
| Distance: | -103 |
| Num_trans: | 2516 |
| All_trans: | HGNC:7983 |
TATA-Box annotation
| Distance to TSS: | -29472 |
|---|---|
| Nearest PromoterID: | NM_005775 |
| Entrez ID: | 10174 |
| Nearest Unigene: | Hs.528572 |
| Nearest Refseq: | NM_005775 |
| Nearest Ensembl: | ENSG00000120896 |
| Gene Name: | nuclear receptor subfamily 5 group A member 1 |
| Gene Alias: | SCAM-1|SCAM1|SH3D4 |
| Gene Description: | sorbin and SH3 domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.288557 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
