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Difference between revisions of "TSS:Hg 243110.1"

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Line 2: Line 2:
 
|NF-M=
 
|NF-M=
 
|NFM=
 
|NFM=
|all_trans=ENST00000679355.1:0 ENST00000681045.1:0 ENST00000681424.1:0 ENST00000681675.1:0 ENST00000681544.1:0 ENST00000680272.1:0 ENST00000680257.1:-11 ENST00000680032.1:-11 ENST00000681540.1:-11 ENST00000680234.1:-11 X87949:20 ENST00000679475.1:24 ENST00000680494.1:24 ENST00000681774.1:24 ENST00000324460.7:25 NM_005347:25 AK293604:25 ENST00000680640.1:26 BC020235:38 LP895631:38 AJ271729:229 EU794617:229 AF216292:242 DQ892173:242 DQ895368:242 AB527282:242 AF188611:298
+
|all_trans=HGNC:5238
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.01
 
|cpg_percent=0.01
Line 24: Line 24:
 
|nearest_refseq=NM_005382
 
|nearest_refseq=NM_005382
 
|nearest_unigene=Hs.458657
 
|nearest_unigene=Hs.458657
|num_trans=27
+
|num_trans=3309
 
|species=human
 
|species=human
 
|start=125241367
 
|start=125241367

Latest revision as of 15:02, 21 July 2021

Basic information about the TSS


TSS ID:hg_243110.1
Species:human
Chr:chr9
TSS Classification:yes
Start:125241367
End:125241371
Strand:-
TSS Score:1
Start of the center position in the TSS region:125241369
End of the center position in the TSS region:125241370



Gene and protein annotation


Transcript_name:ENST00000679355.1 ENST00000681045.1 ENST00000681424.1 ENST00000681675.1 ENST00000681544.1 ENST00000680272.1
Distance:0
GeneID:3309
HGNC/MGI_ID:HGNC:5238
UniProt_ID:
Gene_name:heat shock protein family A (Hsp70) member 5
Gene_symbol:HSPA5
Gene_synonyms:BiP
Gene_source:HGNC:5238



Transcript annotation


Transcript_name:ENST00000679355.1 ENST00000681045.1 ENST00000681424.1 ENST00000681675.1 ENST00000681544.1 ENST00000680272.1
Distance:0
Num_trans:3309
All_trans:HGNC:5238



TATA-Box annotation


Distance to TSS:3661
Nearest PromoterID:NM_001105541
Entrez ID:4741
Nearest Unigene:Hs.458657
Nearest Refseq:NM_005382
Nearest Ensembl:ENSG00000104722
Gene Name:heat shock protein family A (Hsp70) member 5
Gene Alias:NEF3|NF-M|NFM
Gene Description:neurofilament medium
Gene Type:protein-coding
CpG%:0.01
GC%:0.41791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):