Difference between revisions of "TSS:Hg 243131.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:4425 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=106 |
| − | |distance_to_tss= | + | |distance_to_tss=-36191 |
| − | |end= | + | |end=128260666 |
|end_of_center_position=128260666 | |end_of_center_position=128260666 | ||
| − | |entrez_id= | + | |entrez_id=5516 |
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
| − | |gene_alias= | + | |gene_alias=PP2Abeta{{!}}PP2CB |
| − | |gene_description= | + | |gene_description=protein phosphatase 2 catalytic subunit beta |
| − | |gene_id= | + | |gene_id=2801 |
| − | |gene_name= | + | |gene_name=golgin A2 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:4425 |
| − | |gene_symbol= | + | |gene_symbol=GOLGA2 |
| − | |gene_synonyms= | + | |gene_synonyms=GM130 golgin-95 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:4425 |
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000104695 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001009552 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_004156 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.491440 |
| − | |num_trans= | + | |num_trans=2801 |
|species=human | |species=human | ||
| − | |start= | + | |start=128260665 |
|start_of_center_position=128260665 | |start_of_center_position=128260665 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000639983.1 BT007248 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_243131.1 | |tss_id=hg_243131.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1W2PQY5 |
}} | }} | ||
Latest revision as of 15:02, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 128260665 |
|---|---|
| End of the center position in the TSS region: | 128260666 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000639983.1 BT007248 |
|---|---|
| Distance: | 106 |
| Num_trans: | 2801 |
| All_trans: | HGNC:4425 |
TATA-Box annotation
| Distance to TSS: | -36191 |
|---|---|
| Nearest PromoterID: | NM_001009552 |
| Entrez ID: | 5516 |
| Nearest Unigene: | Hs.491440 |
| Nearest Refseq: | NM_004156 |
| Nearest Ensembl: | ENSG00000104695 |
| Gene Name: | golgin A2 |
| Gene Alias: | PP2Abeta|PP2CB |
| Gene Description: | protein phosphatase 2 catalytic subunit beta |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
