Difference between revisions of "TSS:Hg 243181.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 6: | Line 6: | ||
|IMD26= | |IMD26= | ||
|XRCC7= | |XRCC7= | ||
| − | |all_trans= | + | |all_trans=HGNC:7881 |
| − | |chr= | + | |chr=chr9 |
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=-63 |
|distance_to_tss=1 | |distance_to_tss=1 | ||
| − | |end= | + | |end=136545934 |
|end_of_center_position=136545934 | |end_of_center_position=136545934 | ||
|entrez_id=5591 | |entrez_id=5591 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=DNA-PKcs | + | |gene_alias=DNA-PKC{{!}}DNA-PKcs{{!}}DNAPK{{!}}DNAPKc{{!}}DNPK1{{!}}HYRC{{!}}HYRC1{{!}}IMD26{{!}}XRCC7{{!}}p350 |
| − | |gene_description= | + | |gene_description=protein kinase, DNA-activated, catalytic subunit |
| − | |gene_id= | + | |gene_id=4851 |
| − | |gene_name= | + | |gene_name=notch receptor 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:7881 |
| − | |gene_symbol= | + | |gene_symbol=NOTCH1 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:7881 |
|nearest_ensembl=ENSG00000253729 | |nearest_ensembl=ENSG00000253729 | ||
|nearest_promoter_id=NM_006904 | |nearest_promoter_id=NM_006904 | ||
|nearest_refseq=NM_006904 | |nearest_refseq=NM_006904 | ||
|nearest_unigene=Hs.491682 | |nearest_unigene=Hs.491682 | ||
| − | |num_trans= | + | |num_trans=4851 |
|p350= | |p350= | ||
|species=human | |species=human | ||
| − | |start= | + | |start=136545933 |
|start_of_center_position=136545933 | |start_of_center_position=136545933 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000680133.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_243181.1 | |tss_id=hg_243181.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 15:03, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136545933 |
|---|---|
| End of the center position in the TSS region: | 136545934 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000680133.1 |
|---|---|
| Distance: | -63 |
| Num_trans: | 4851 |
| All_trans: | HGNC:7881 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_006904 |
| Entrez ID: | 5591 |
| Nearest Unigene: | Hs.491682 |
| Nearest Refseq: | NM_006904 |
| Nearest Ensembl: | ENSG00000253729 |
| Gene Name: | notch receptor 1 |
| Gene Alias: | DNA-PKC|DNA-PKcs|DNAPK|DNAPKc|DNPK1|HYRC|HYRC1|IMD26|XRCC7|p350 |
| Gene Description: | protein kinase, DNA-activated, catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
