Personal tools

Difference between revisions of "TSS:Hg 243236.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000519668.1:121 NM_001291339:121 uc003xxk.4:121 AJ583433:121 |chr=chr8 |cpg_percent=0 |distance=121 |distance_to_tss=-121 |end=67083727 |entrez_id...")
 
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000519668.1:121 NM_001291339:121 uc003xxk.4:121 AJ583433:121
+
|JBTS21=
|chr=chr8
+
|all_trans=HGNC:640
 +
|chr=chr9
 
|cpg_percent=0
 
|cpg_percent=0
|distance=121
+
|distance=8
 
|distance_to_tss=-121
 
|distance_to_tss=-121
|end=67083727
+
|end=33402527
 +
|end_of_center_position=33402527
 
|entrez_id=79848
 
|entrez_id=79848
 
|gc_percent=0.39801
 
|gc_percent=0.39801
|gene_alias=CSPP|JBTS21
+
|gene_alias=CSPP{{!}}JBTS21
 
|gene_description=centrosome and spindle pole associated protein 1
 
|gene_description=centrosome and spindle pole associated protein 1
|gene_id=79848
+
|gene_id=364
|gene_name=centrosome and spindle pole associated protein 1
+
|gene_name=aquaporin 7
|gene_source=HGNC:26193
+
|gene_source=HGNC:640
|gene_symbol=CSPP1
+
|gene_symbol=AQP7
|gene_synonyms=CSPP FLJ22490 JBTS21
+
|gene_synonyms=AQP9 AQPap
 
|gene_type=protein-coding
 
|gene_type=protein-coding
|hgnc_mgi_id=HGNC:26193
+
|hgnc_mgi_id=HGNC:640
 
|nearest_ensembl=ENSG00000104218
 
|nearest_ensembl=ENSG00000104218
 
|nearest_promoter_id=NM_001291339
 
|nearest_promoter_id=NM_001291339
 
|nearest_refseq=NM_024790
 
|nearest_refseq=NM_024790
 
|nearest_unigene=Hs.370147
 
|nearest_unigene=Hs.370147
|num_trans=4
+
|num_trans=364
 
|species=human
 
|species=human
|start=67083726
+
|start=33402526
|strand=+
+
|start_of_center_position=33402526
|transcript_name=ENST00000519668.1 NM_001291339 uc003xxk.4 AJ583433
+
|strand=-
|tss_classification=no
+
|transcript_name=AB006190
 +
|tss_classification=yes
 
|tss_id=hg_243236.1
 
|tss_id=hg_243236.1
 
|tss_score=1
 
|tss_score=1
|uniprot_id=Q1MSJ5 Q9H688
+
|uniprot_id=
 
}}
 
}}

Latest revision as of 15:04, 21 July 2021

Basic information about the TSS


TSS ID:hg_243236.1
Species:human
Chr:chr9
TSS Classification:yes
Start:33402526
End:33402527
Strand:-
TSS Score:1
Start of the center position in the TSS region:33402526
End of the center position in the TSS region:33402527



Gene and protein annotation


Transcript_name:AB006190
Distance:8
GeneID:364
HGNC/MGI_ID:HGNC:640
UniProt_ID:
Gene_name:aquaporin 7
Gene_symbol:AQP7
Gene_synonyms:AQP9 AQPap
Gene_source:HGNC:640



Transcript annotation


Transcript_name:AB006190
Distance:8
Num_trans:364
All_trans:HGNC:640



TATA-Box annotation


Distance to TSS:-121
Nearest PromoterID:NM_001291339
Entrez ID:79848
Nearest Unigene:Hs.370147
Nearest Refseq:NM_024790
Nearest Ensembl:ENSG00000104218
Gene Name:aquaporin 7
Gene Alias:CSPP|JBTS21
Gene Description:centrosome and spindle pole associated protein 1
Gene Type:protein-coding
CpG%:0
GC%:0.39801
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):