Difference between revisions of "TSS:Hg 243239.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |chr= | + | |all_trans=HGNC:14185 |
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=-148 |
|distance_to_tss=-11945 | |distance_to_tss=-11945 | ||
| − | |end= | + | |end=33928687 |
| + | |end_of_center_position=33928687 | ||
|entrez_id=100616372 | |entrez_id=100616372 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=microRNA 4659b | |gene_description=microRNA 4659b | ||
| − | |gene_name= | + | |gene_id=55833 |
| + | |gene_name=ubiquitin associated protein 2 | ||
| + | |gene_source=HGNC:14185 | ||
| + | |gene_symbol=UBAP2 | ||
| + | |gene_synonyms=FLJ22435 KIAA1491 bA176F3.5 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:14185 | ||
|nearest_ensembl=ENSG00000283386 | |nearest_ensembl=ENSG00000283386 | ||
|nearest_promoter_id=NR_039807 | |nearest_promoter_id=NR_039807 | ||
|nearest_refseq=NR_039807 | |nearest_refseq=NR_039807 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=55833 |
|species=human | |species=human | ||
| − | |start= | + | |start=33928686 |
| + | |start_of_center_position=33928686 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000379235.5 AK057564 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243239.1 | |tss_id=hg_243239.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=B3KQ73 | ||
}} | }} | ||
Latest revision as of 15:05, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 33928686 |
|---|---|
| End of the center position in the TSS region: | 33928687 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379235.5 AK057564 |
|---|---|
| Distance: | -148 |
| Num_trans: | 55833 |
| All_trans: | HGNC:14185 |
TATA-Box annotation
| Distance to TSS: | -11945 |
|---|---|
| Nearest PromoterID: | NR_039807 |
| Entrez ID: | 100616372 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039807 |
| Nearest Ensembl: | ENSG00000283386 |
| Gene Name: | ubiquitin associated protein 2 |
| Gene Alias: | - |
| Gene Description: | microRNA 4659b |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
