Difference between revisions of "TSS:Hg 243394.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:9585 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=117 | |distance=117 | ||
|distance_to_tss=169 | |distance_to_tss=169 | ||
| − | |end= | + | |end=95508479 |
|end_of_center_position=95508479 | |end_of_center_position=95508479 | ||
|entrez_id=54107 | |entrez_id=54107 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_017443 | |nearest_refseq=NM_017443 | ||
|nearest_unigene=Hs.108112 | |nearest_unigene=Hs.108112 | ||
| − | |num_trans= | + | |num_trans=5727 |
|species=human | |species=human | ||
| − | |start= | + | |start=95508478 |
|start_of_center_position=95508478 | |start_of_center_position=95508478 | ||
| − | |strand= | + | |strand=- |
|transcript_name=BC152919 AB527342 | |transcript_name=BC152919 AB527342 | ||
|tss_classification=yes | |tss_classification=yes | ||
Latest revision as of 15:08, 21 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 95508478 |
|---|---|
| End of the center position in the TSS region: | 95508479 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC152919 AB527342 |
|---|---|
| Distance: | 117 |
| Num_trans: | 5727 |
| All_trans: | HGNC:9585 |
TATA-Box annotation
| Distance to TSS: | 169 |
|---|---|
| Nearest PromoterID: | NR_027261 |
| Entrez ID: | 54107 |
| Nearest Unigene: | Hs.108112 |
| Nearest Refseq: | NM_017443 |
| Nearest Ensembl: | ENSG00000148229 |
| Gene Name: | patched 1 |
| Gene Alias: | CHARAC17|CHRAC17|CHRAC2|YBL1|p17 |
| Gene Description: | DNA polymerase epsilon 3, accessory subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
