Difference between revisions of "TSS:Hg 27536.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000379677.2:0 NR_135200:0 uc002rll.2:0 AK124439:0 |chr=chr2 |cpg_percent=0.085 |distance=0 |distance_to_tss=-5 |end=27715748 |entrez_id=100129995...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:50858 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-5 | |distance_to_tss=-5 | ||
|end=27715748 | |end=27715748 | ||
| + | |end_of_center_position=27715738 | ||
|entrez_id=100129995 | |entrez_id=100129995 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_135200 | |nearest_refseq=NR_135200 | ||
|nearest_unigene=Hs.515878 | |nearest_unigene=Hs.515878 | ||
| − | |num_trans= | + | |num_trans=100129995 |
|species=human | |species=human | ||
|start=27715726 | |start=27715726 | ||
| + | |start_of_center_position=27715737 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000379677 | + | |transcript_name=ENST00000379677.2 AK124439 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_27536.1 | |tss_id=hg_27536.1 | ||
Latest revision as of 16:33, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 27715737 |
|---|---|
| End of the center position in the TSS region: | 27715738 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379677.2 AK124439 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100129995 |
| All_trans: | HGNC:50858 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NR_135200 |
| Entrez ID: | 100129995 |
| Nearest Unigene: | Hs.515878 |
| Nearest Refseq: | NR_135200 |
| Nearest Ensembl: | ENSG00000205334 |
| Gene Name: | long intergenic non-protein coding RNA 1460 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1460 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
