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Difference between revisions of "TSS:Hg 3033.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK055150:-32 ENST00000669294.1:-36 ENST00000419531.3:-39 NR_034014:-41 NR_034015:-41 NR_108106:-41 AK296298:-41 ENST00000663144.1:-59 ENST00000653297.1:-64 ENST00000649834.1:-64
+
|all_trans=HGNC:49450
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.105
 
|cpg_percent=0.105
Line 22: Line 22:
 
|nearest_refseq=NR_034014
 
|nearest_refseq=NR_034014
 
|nearest_unigene=Hs.680604
 
|nearest_unigene=Hs.680604
|num_trans=10
+
|num_trans=100131060
 
|species=human
 
|species=human
 
|start=58785191
 
|start=58785191

Latest revision as of 17:33, 21 July 2021

Basic information about the TSS


TSS ID:hg_3033.1
Species:human
Chr:chr1
TSS Classification:yes
Start:58785191
End:58785207
Strand:+
TSS Score:1
Start of the center position in the TSS region:58785199
End of the center position in the TSS region:58785200



Gene and protein annotation


Transcript_name:AK055150
Distance:-32
GeneID:100131060
HGNC/MGI_ID:HGNC:49450
UniProt_ID:
Gene_name:long intergenic non-protein coding RNA 1135
Gene_symbol:LINC01135
Gene_synonyms:
Gene_source:HGNC:49450



Transcript annotation


Transcript_name:AK055150
Distance:-32
Num_trans:100131060
All_trans:HGNC:49450



TATA-Box annotation


Distance to TSS:48
Nearest PromoterID:NR_034015
Entrez ID:100131060
Nearest Unigene:Hs.680604
Nearest Refseq:NR_034014
Nearest Ensembl:ENSG00000234807
Gene Name:long intergenic non-protein coding RNA 1135
Gene Alias:-
Gene Description:long intergenic non-protein coding RNA 1135
Gene Type:ncRNA
CpG%:0.105
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):