Difference between revisions of "TSS:Hg 3099.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000357977.5:-88 uc001czx.4:-88 AK024964:-88 |chr=chr1 |cpg_percent=0.025 |distance=-88 |distance_to_tss=-150652 |end=61404176 |entrez_id=645030 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7784 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-150652 | |distance_to_tss=-150652 | ||
|end=61404176 | |end=61404176 | ||
| + | |end_of_center_position=61404170 | ||
|entrez_id=645030 | |entrez_id=645030 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| Line 11: | Line 12: | ||
|gene_description=NFIA antisense RNA 1 | |gene_description=NFIA antisense RNA 1 | ||
|gene_id=4774 | |gene_id=4774 | ||
| − | |gene_name=nuclear factor I | + | |gene_name=nuclear factor I A |
|gene_source=HGNC:7784 | |gene_source=HGNC:7784 | ||
|gene_symbol=NFIA | |gene_symbol=NFIA | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_104180 | |nearest_refseq=NR_104180 | ||
|nearest_unigene=Hs.632410 | |nearest_unigene=Hs.632410 | ||
| − | |num_trans= | + | |num_trans=4774 |
|species=human | |species=human | ||
|start=61404163 | |start=61404163 | ||
| + | |start_of_center_position=61404169 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000357977.5 | + | |transcript_name=ENST00000357977.5 AK024964 |
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=hg_3099.1 | |tss_id=hg_3099.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=S4R3K5 | |uniprot_id=S4R3K5 | ||
}} | }} | ||
Latest revision as of 17:47, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 61404169 |
|---|---|
| End of the center position in the TSS region: | 61404170 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000357977.5 AK024964 |
|---|---|
| Distance: | -88 |
| Num_trans: | 4774 |
| All_trans: | HGNC:7784 |
TATA-Box annotation
| Distance to TSS: | -150652 |
|---|---|
| Nearest PromoterID: | NR_104180 |
| Entrez ID: | 645030 |
| Nearest Unigene: | Hs.632410 |
| Nearest Refseq: | NR_104180 |
| Nearest Ensembl: | ENSG00000237853 |
| Gene Name: | nuclear factor I A |
| Gene Alias: | - |
| Gene Description: | NFIA antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
