Difference between revisions of "TSS:Hg 3103.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BX537823:-16 AK096483:385 |chr=chr1 |cpg_percent=0.01 |distance=-16 |distance_to_tss=-195536 |end=61458708 |entrez_id=414927 |gc_percent=0.308458 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:7784 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-195536 | |distance_to_tss=-195536 | ||
|end=61458708 | |end=61458708 | ||
| + | |end_of_center_position=61458706 | ||
|entrez_id=414927 | |entrez_id=414927 | ||
|gc_percent=0.308458 | |gc_percent=0.308458 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene |
|gene_id=4774 | |gene_id=4774 | ||
| − | |gene_name=nuclear factor I | + | |gene_name=nuclear factor I A |
|gene_source=HGNC:7784 | |gene_source=HGNC:7784 | ||
|gene_symbol=NFIA | |gene_symbol=NFIA | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_073400 | |nearest_refseq=NR_073400 | ||
|nearest_unigene=Hs.123471 | |nearest_unigene=Hs.123471 | ||
| − | |num_trans= | + | |num_trans=4774 |
|species=human | |species=human | ||
|start=61458703 | |start=61458703 | ||
| + | |start_of_center_position=61458705 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BX537823 | |transcript_name=BX537823 | ||
Latest revision as of 17:48, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 61458705 |
|---|---|
| End of the center position in the TSS region: | 61458706 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BX537823 |
|---|---|
| Distance: | -16 |
| Num_trans: | 4774 |
| All_trans: | HGNC:7784 |
TATA-Box annotation
| Distance to TSS: | -195536 |
|---|---|
| Nearest PromoterID: | NR_073400 |
| Entrez ID: | 414927 |
| Nearest Unigene: | Hs.123471 |
| Nearest Refseq: | NR_073400 |
| Nearest Ensembl: | |
| Gene Name: | nuclear factor I A |
| Gene Alias: | - |
| Gene Description: | sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.01 |
| GC%: | 0.308458 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
