Difference between revisions of "TSS:Hg 33550.1"
From referenceTSS
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=HGNC:52674 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=213284221 | |end=213284221 | ||
| + | |end_of_center_position=213284210 | ||
|entrez_id=100130451 | |entrez_id=100130451 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=SPAG16 divergent transcript |
|gene_id=100130451 | |gene_id=100130451 | ||
| − | |gene_name= | + | |gene_name=SPAG16 divergent transcript |
| − | |gene_source= | + | |gene_source=HGNC:52674 |
| − | |gene_symbol= | + | |gene_symbol=SPAG16-DT |
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:52674 |
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_161186 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_144752 |
|nearest_unigene=Hs.608433 | |nearest_unigene=Hs.608433 | ||
| − | |num_trans= | + | |num_trans=100130451 |
|species=human | |species=human | ||
|start=213284197 | |start=213284197 | ||
| + | |start_of_center_position=213284209 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000360083.3 | + | |transcript_name=ENST00000360083.3 AK124960 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_33550.1 | |tss_id=hg_33550.1 | ||
Latest revision as of 18:42, 21 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 213284209 |
|---|---|
| End of the center position in the TSS region: | 213284210 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000360083.3 AK124960 |
|---|---|
| Distance: | 0 |
| Num_trans: | 100130451 |
| All_trans: | HGNC:52674 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_161186 |
| Entrez ID: | 100130451 |
| Nearest Unigene: | Hs.608433 |
| Nearest Refseq: | NR_144752 |
| Nearest Ensembl: | |
| Gene Name: | SPAG16 divergent transcript |
| Gene Alias: | - |
| Gene Description: | SPAG16 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
