Difference between revisions of "TSS:Hg 3707.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000469377.6 | + | |all_trans=NM_001366004:-52 NM_001366008:68 ENST00000469377.6:-112 AK123422:-112 ENST00000492666.1:-119 NM_001366003:-119 ENST00000370721.5:-145 ENST00000370727.5:-145 ENST00000370725.5:-145 ENST00000370723.5:-145 ENST00000370728.5:-145 ENST00000370730.5:-145 ENST00000473719.5:-151 BC031321:-151 ENST00000674386.1:-161 ENST00000674378.1:-164 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance=- | + | |distance=-52 |
| − | |distance_to_tss= | + | |distance_to_tss=60 |
|end=81306327 | |end=81306327 | ||
|end_of_center_position=81306319 | |end_of_center_position=81306319 | ||
| − | |entrez_id= | + | |entrez_id=23266 |
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| − | |gene_alias= | + | |gene_alias=CIRL2{{!}}CL2{{!}}LEC1{{!}}LPHH1{{!}}LPHN2 |
| − | |gene_description= | + | |gene_description=adhesion G protein-coupled receptor L2 |
|gene_id=23266 | |gene_id=23266 | ||
|gene_name=adhesion G protein-coupled receptor L2 | |gene_name=adhesion G protein-coupled receptor L2 | ||
| Line 16: | Line 16: | ||
|gene_symbol=ADGRL2 | |gene_symbol=ADGRL2 | ||
|gene_synonyms=KIAA0786 LEC1 | |gene_synonyms=KIAA0786 LEC1 | ||
| − | |gene_type= | + | |gene_type=protein-coding |
|hgnc_mgi_id=HGNC:18582 | |hgnc_mgi_id=HGNC:18582 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000117114 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366004 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_012302 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.24212 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=81306310 | |start=81306310 | ||
|start_of_center_position=81306318 | |start_of_center_position=81306318 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_001366004.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_3707.1 | |tss_id=hg_3707.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Latest revision as of 19:58, 21 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81306318 |
|---|---|
| End of the center position in the TSS region: | 81306319 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001366004.1 |
|---|---|
| Distance: | -52 |
| Num_trans: | 16 |
| All_trans: | NM_001366004:-52 NM_001366008:68 ENST00000469377.6:-112 AK123422:-112 ENST00000492666.1:-119 NM_001366003:-119 ENST00000370721.5:-145 ENST00000370727.5:-145 ENST00000370725.5:-145 ENST00000370723.5:-145 ENST00000370728.5:-145 ENST00000370730.5:-145 ENST00000473719.5:-151 BC031321:-151 ENST00000674386.1:-161 ENST00000674378.1:-164 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001366004 |
| Entrez ID: | 23266 |
| Nearest Unigene: | Hs.24212 |
| Nearest Refseq: | NM_012302 |
| Nearest Ensembl: | ENSG00000117114 |
| Gene Name: | adhesion G protein-coupled receptor L2 |
| Gene Alias: | CIRL2|CL2|LEC1|LPHH1|LPHN2 |
| Gene Description: | adhesion G protein-coupled receptor L2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
