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Difference between revisions of "TSS:Hg 4069.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=BC084562:27 NR_034091:-70 AK307291:-70 ENST00000431770.1:148 uc057ikm.1:148 ENST00000427243.5:199 ENST00000417401.1:199 uc057ikn.1:199 uc057iko.1:199
+
|all_trans=HGNC:40093
 
|chr=chr1
 
|chr=chr1
 
|cpg_percent=0.02
 
|cpg_percent=0.02
Line 12: Line 12:
 
|gene_description=uncharacterized LOC100129046
 
|gene_description=uncharacterized LOC100129046
 
|gene_id=100129046
 
|gene_id=100129046
|gene_name=uncharacterized LOC100129046
+
|gene_name=BCAR3 antisense RNA 1
|gene_source=EntrezGene:100129046
+
|gene_source=HGNC:40093
|gene_symbol=LOC100129046
+
|gene_symbol=BCAR3-AS1
 
|gene_synonyms=
 
|gene_synonyms=
 
|gene_type=ncRNA
 
|gene_type=ncRNA
|hgnc_mgi_id=
+
|hgnc_mgi_id=HGNC:40093
 
|nearest_ensembl=
 
|nearest_ensembl=
 
|nearest_promoter_id=NR_034091
 
|nearest_promoter_id=NR_034091
 
|nearest_refseq=NR_034091
 
|nearest_refseq=NR_034091
 
|nearest_unigene=Hs.729244
 
|nearest_unigene=Hs.729244
|num_trans=9
+
|num_trans=100129046
 
|species=human
 
|species=human
 
|start=93592037
 
|start=93592037

Latest revision as of 21:16, 21 July 2021

Basic information about the TSS


TSS ID:hg_4069.1
Species:human
Chr:chr1
TSS Classification:yes
Start:93592037
End:93592051
Strand:+
TSS Score:1
Start of the center position in the TSS region:93592044
End of the center position in the TSS region:93592045



Gene and protein annotation


Transcript_name:BC084562
Distance:27
GeneID:100129046
HGNC/MGI_ID:HGNC:40093
UniProt_ID:
Gene_name:BCAR3 antisense RNA 1
Gene_symbol:BCAR3-AS1
Gene_synonyms:
Gene_source:HGNC:40093



Transcript annotation


Transcript_name:BC084562
Distance:27
Num_trans:100129046
All_trans:HGNC:40093



TATA-Box annotation


Distance to TSS:76
Nearest PromoterID:NR_034091
Entrez ID:100129046
Nearest Unigene:Hs.729244
Nearest Refseq:NR_034091
Nearest Ensembl:
Gene Name:BCAR3 antisense RNA 1
Gene Alias:-
Gene Description:uncharacterized LOC100129046
Gene Type:ncRNA
CpG%:0.02
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):